Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNX30Q5VWJ9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.57■■□□□ 1.36
SNX30Q5VWJ9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SNX30Q5VWJ9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SNX30Q5VWJ9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.57■■□□□ 1.36
SNX30Q5VWJ9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.57■■□□□ 1.36
SNX30Q5VWJ9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNX30Q5VWJ9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNX30Q5VWJ9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNX30Q5VWJ9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
SNX30Q5VWJ9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SNX30Q5VWJ9 LINC01124-201ENST00000409786 2117 ntBASIC23.56■■□□□ 1.36
SNX30Q5VWJ9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.56■■□□□ 1.36
SNX30Q5VWJ9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SNX30Q5VWJ9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.56■■□□□ 1.36
SNX30Q5VWJ9 AC011298.3-201ENST00000615796 283 ntBASIC23.56■■□□□ 1.36
SNX30Q5VWJ9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.56■■□□□ 1.36
SNX30Q5VWJ9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SNX30Q5VWJ9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SNX30Q5VWJ9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
SNX30Q5VWJ9 AL355001.2-201ENST00000620617 1191 ntBASIC23.55■■□□□ 1.36
SNX30Q5VWJ9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNX30Q5VWJ9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNX30Q5VWJ9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.55■■□□□ 1.36
SNX30Q5VWJ9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.55■■□□□ 1.36
SNX30Q5VWJ9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNX30Q5VWJ9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNX30Q5VWJ9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNX30Q5VWJ9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNX30Q5VWJ9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SNX30Q5VWJ9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNX30Q5VWJ9 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.54■■□□□ 1.36
SNX30Q5VWJ9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNX30Q5VWJ9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.54■■□□□ 1.36
SNX30Q5VWJ9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNX30Q5VWJ9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SNX30Q5VWJ9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.54■■□□□ 1.36
SNX30Q5VWJ9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNX30Q5VWJ9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNX30Q5VWJ9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.53■■□□□ 1.36
SNX30Q5VWJ9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNX30Q5VWJ9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
SNX30Q5VWJ9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.53■■□□□ 1.36
SNX30Q5VWJ9 AC006455.2-201ENST00000429931 906 ntBASIC23.53■■□□□ 1.36
SNX30Q5VWJ9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.53■■□□□ 1.36
SNX30Q5VWJ9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.53■■□□□ 1.36
SNX30Q5VWJ9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SNX30Q5VWJ9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNX30Q5VWJ9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SNX30Q5VWJ9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SNX30Q5VWJ9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SNX30Q5VWJ9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.52■■□□□ 1.36
SNX30Q5VWJ9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.52■■□□□ 1.36
SNX30Q5VWJ9 AC009086.3-201ENST00000623486 1008 ntBASIC23.52■■□□□ 1.36
SNX30Q5VWJ9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNX30Q5VWJ9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SNX30Q5VWJ9 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.51■■□□□ 1.35
SNX30Q5VWJ9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNX30Q5VWJ9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SNX30Q5VWJ9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNX30Q5VWJ9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNX30Q5VWJ9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.51■■□□□ 1.35
SNX30Q5VWJ9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNX30Q5VWJ9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.51■■□□□ 1.35
SNX30Q5VWJ9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 MIR3181-201ENST00000578512 73 ntBASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 MIR4767-201ENST00000582827 78 ntBASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.5■■□□□ 1.35
SNX30Q5VWJ9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 AC142381.2-201ENST00000566120 298 ntBASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 AC136469.2-201ENST00000623944 1028 ntBASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 AL136967.2-201ENST00000623968 743 ntBASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNX30Q5VWJ9 FP325331.1-202ENST00000623531 1380 ntBASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms