Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 ECEL1P1-201ENST00000373592 1742 ntBASIC17.69■□□□□ 0.42
FAM78BQ5VT40 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM78BQ5VT40 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM78BQ5VT40 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM78BQ5VT40 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM78BQ5VT40 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM78BQ5VT40 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM78BQ5VT40 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM78BQ5VT40 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
FAM78BQ5VT40 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM78BQ5VT40 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM78BQ5VT40 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.68■□□□□ 0.42
FAM78BQ5VT40 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.68■□□□□ 0.42
FAM78BQ5VT40 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM78BQ5VT40 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
FAM78BQ5VT40 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
FAM78BQ5VT40 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM78BQ5VT40 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
FAM78BQ5VT40 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM78BQ5VT40 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FAM78BQ5VT40 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.66■□□□□ 0.42
FAM78BQ5VT40 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM78BQ5VT40 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
FAM78BQ5VT40 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.66■□□□□ 0.42
FAM78BQ5VT40 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FAM78BQ5VT40 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM78BQ5VT40 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.65■□□□□ 0.42
FAM78BQ5VT40 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.65■□□□□ 0.42
FAM78BQ5VT40 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
FAM78BQ5VT40 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.65■□□□□ 0.42
FAM78BQ5VT40 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FAM78BQ5VT40 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
FAM78BQ5VT40 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.65■□□□□ 0.42
FAM78BQ5VT40 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FAM78BQ5VT40 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 AL137060.1-201ENST00000618151 2648 ntBASIC17.64■□□□□ 0.41
FAM78BQ5VT40 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM78BQ5VT40 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
FAM78BQ5VT40 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.63■□□□□ 0.41
FAM78BQ5VT40 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
FAM78BQ5VT40 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.63■□□□□ 0.41
FAM78BQ5VT40 AL022069.1-201ENST00000568025 1636 ntBASIC17.63■□□□□ 0.41
FAM78BQ5VT40 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
FAM78BQ5VT40 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
FAM78BQ5VT40 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FAM78BQ5VT40 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FAM78BQ5VT40 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
FAM78BQ5VT40 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FAM78BQ5VT40 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.62■□□□□ 0.41
FAM78BQ5VT40 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms