Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HOXC12P31275 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXC12P31275 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HOXC12P31275 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC12P31275 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HOXC12P31275 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC12P31275 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXC12P31275 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXC12P31275 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXC12P31275 MIR6821-201ENST00000617625 74 ntBASIC19.79■□□□□ 0.76
HOXC12P31275 AL136967.2-201ENST00000623968 743 ntBASIC19.79■□□□□ 0.76
HOXC12P31275 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HOXC12P31275 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HOXC12P31275 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC12P31275 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HOXC12P31275 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC12P31275 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC12P31275 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC12P31275 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC12P31275 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HOXC12P31275 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXC12P31275 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXC12P31275 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HOXC12P31275 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HOXC12P31275 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
HOXC12P31275 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.78■□□□□ 0.76
HOXC12P31275 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC12P31275 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC12P31275 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC12P31275 AC009102.2-201ENST00000606772 1639 ntBASIC19.77■□□□□ 0.76
HOXC12P31275 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC12P31275 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC12P31275 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC12P31275 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXC12P31275 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC12P31275 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.77■□□□□ 0.76
HOXC12P31275 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.77■□□□□ 0.76
HOXC12P31275 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXC12P31275 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC12P31275 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC12P31275 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC12P31275 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC12P31275 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.77■□□□□ 0.76
HOXC12P31275 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
HOXC12P31275 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC12P31275 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HOXC12P31275 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC12P31275 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC12P31275 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC12P31275 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HOXC12P31275 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC12P31275 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.76■□□□□ 0.75
HOXC12P31275 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.76■□□□□ 0.75
HOXC12P31275 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC12P31275 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC12P31275 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC12P31275 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC12P31275 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
HOXC12P31275 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC12P31275 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
HOXC12P31275 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HOXC12P31275 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 AC097381.1-201ENST00000429019 1296 ntBASIC19.74■□□□□ 0.75
HOXC12P31275 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC12P31275 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 DUX4L19-201ENST00000557448 1267 ntBASIC19.74■□□□□ 0.75
HOXC12P31275 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC12P31275 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXC12P31275 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXC12P31275 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXC12P31275 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HOXC12P31275 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC12P31275 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC12P31275 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC12P31275 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HOXC12P31275 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HOXC12P31275 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC12P31275 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXC12P31275 AC241377.3-202ENST00000626088 1088 ntBASIC19.73■□□□□ 0.75
HOXC12P31275 AC241585.3-202ENST00000628937 1088 ntBASIC19.73■□□□□ 0.75
HOXC12P31275 AC245100.8-202ENST00000629247 1058 ntBASIC19.73■□□□□ 0.75
HOXC12P31275 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC12P31275 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXC12P31275 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC12P31275 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HOXC12P31275 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC12P31275 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC12P31275 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms