Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 MTDHP2-201ENST00000601468 714 ntBASIC20.61■□□□□ 0.89
RPS4Y1P22090 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPS4Y1P22090 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
RPS4Y1P22090 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RPS4Y1P22090 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.6■□□□□ 0.89
RPS4Y1P22090 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPS4Y1P22090 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RPS4Y1P22090 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
RPS4Y1P22090 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPS4Y1P22090 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPS4Y1P22090 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RPS4Y1P22090 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPS4Y1P22090 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.59■□□□□ 0.89
RPS4Y1P22090 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPS4Y1P22090 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RPS4Y1P22090 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RPS4Y1P22090 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.58■□□□□ 0.89
RPS4Y1P22090 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPS4Y1P22090 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPS4Y1P22090 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RPS4Y1P22090 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RPS4Y1P22090 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RPS4Y1P22090 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.58■□□□□ 0.89
RPS4Y1P22090 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPS4Y1P22090 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPS4Y1P22090 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
RPS4Y1P22090 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.58■□□□□ 0.88
RPS4Y1P22090 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPS4Y1P22090 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPS4Y1P22090 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPS4Y1P22090 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPS4Y1P22090 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.57■□□□□ 0.88
RPS4Y1P22090 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RPS4Y1P22090 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPS4Y1P22090 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPS4Y1P22090 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RPS4Y1P22090 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.57■□□□□ 0.88
RPS4Y1P22090 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RPS4Y1P22090 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4Y1P22090 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4Y1P22090 AC010997.5-201ENST00000609182 354 ntBASIC20.56■□□□□ 0.88
RPS4Y1P22090 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4Y1P22090 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RPS4Y1P22090 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.56■□□□□ 0.88
RPS4Y1P22090 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.56■□□□□ 0.88
RPS4Y1P22090 FP325331.1-202ENST00000623531 1380 ntBASIC20.56■□□□□ 0.88
RPS4Y1P22090 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4Y1P22090 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.56■□□□□ 0.88
RPS4Y1P22090 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.56■□□□□ 0.88
RPS4Y1P22090 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RPS4Y1P22090 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.55■□□□□ 0.88
RPS4Y1P22090 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.55■□□□□ 0.88
RPS4Y1P22090 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPS4Y1P22090 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.55■□□□□ 0.88
RPS4Y1P22090 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPS4Y1P22090 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.55■□□□□ 0.88
RPS4Y1P22090 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.55■□□□□ 0.88
RPS4Y1P22090 AC233723.2-201ENST00000623798 2106 ntBASIC20.55■□□□□ 0.88
RPS4Y1P22090 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPS4Y1P22090 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4Y1P22090 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.54■□□□□ 0.88
RPS4Y1P22090 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4Y1P22090 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RPS4Y1P22090 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4Y1P22090 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.54■□□□□ 0.88
RPS4Y1P22090 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.54■□□□□ 0.88
RPS4Y1P22090 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.54■□□□□ 0.88
RPS4Y1P22090 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4Y1P22090 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4Y1P22090 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.54■□□□□ 0.88
RPS4Y1P22090 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4Y1P22090 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4Y1P22090 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4Y1P22090 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4Y1P22090 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4Y1P22090 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4Y1P22090 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.53■□□□□ 0.88
RPS4Y1P22090 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4Y1P22090 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.53■□□□□ 0.88
RPS4Y1P22090 TSPY9P-201ENST00000440215 945 ntBASIC20.53■□□□□ 0.88
RPS4Y1P22090 TSPY11P-201ENST00000442607 1045 ntBASIC20.53■□□□□ 0.88
RPS4Y1P22090 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.53■□□□□ 0.88
RPS4Y1P22090 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.53■□□□□ 0.88
RPS4Y1P22090 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4Y1P22090 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4Y1P22090 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4Y1P22090 LINC01529-204ENST00000636474 1715 ntBASIC20.53■□□□□ 0.88
RPS4Y1P22090 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4Y1P22090 AC009102.2-201ENST00000606772 1639 ntBASIC20.53■□□□□ 0.88
RPS4Y1P22090 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RPS4Y1P22090 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPS4Y1P22090 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPS4Y1P22090 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPS4Y1P22090 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.52■□□□□ 0.88
RPS4Y1P22090 UNC93B8-201ENST00000511903 705 ntBASIC20.52■□□□□ 0.88
RPS4Y1P22090 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.52■□□□□ 0.88
RPS4Y1P22090 AL117328.2-201ENST00000624617 1940 ntBASIC20.52■□□□□ 0.88
RPS4Y1P22090 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPS4Y1P22090 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
RPS4Y1P22090 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms