Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSF1P09603 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.27■□□□□ 0.68
CSF1P09603 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSF1P09603 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSF1P09603 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSF1P09603 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSF1P09603 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSF1P09603 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSF1P09603 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSF1P09603 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSF1P09603 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSF1P09603 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.27■□□□□ 0.67
CSF1P09603 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSF1P09603 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.27■□□□□ 0.67
CSF1P09603 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CSF1P09603 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.26■□□□□ 0.67
CSF1P09603 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSF1P09603 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSF1P09603 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CSF1P09603 RP9P-202ENST00000450133 1212 ntBASIC19.26■□□□□ 0.67
CSF1P09603 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.26■□□□□ 0.67
CSF1P09603 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSF1P09603 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CSF1P09603 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
CSF1P09603 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.26■□□□□ 0.67
CSF1P09603 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSF1P09603 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSF1P09603 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CSF1P09603 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSF1P09603 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSF1P09603 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.25■□□□□ 0.67
CSF1P09603 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CSF1P09603 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.25■□□□□ 0.67
CSF1P09603 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.25■□□□□ 0.67
CSF1P09603 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSF1P09603 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSF1P09603 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.25■□□□□ 0.67
CSF1P09603 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.25■□□□□ 0.67
CSF1P09603 AL451085.2-201ENST00000605085 799 ntBASIC19.25■□□□□ 0.67
CSF1P09603 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSF1P09603 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSF1P09603 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CSF1P09603 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.24■□□□□ 0.67
CSF1P09603 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSF1P09603 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CSF1P09603 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSF1P09603 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSF1P09603 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSF1P09603 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSF1P09603 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSF1P09603 AC139795.1-202ENST00000500444 432 ntBASIC19.24■□□□□ 0.67
CSF1P09603 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.24■□□□□ 0.67
CSF1P09603 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.24■□□□□ 0.67
CSF1P09603 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.24■□□□□ 0.67
CSF1P09603 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.24■□□□□ 0.67
CSF1P09603 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.24■□□□□ 0.67
CSF1P09603 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSF1P09603 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.24■□□□□ 0.67
CSF1P09603 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.24■□□□□ 0.67
CSF1P09603 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSF1P09603 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSF1P09603 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSF1P09603 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSF1P09603 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSF1P09603 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSF1P09603 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSF1P09603 DUX4L9-201ENST00000449051 1259 ntBASIC19.23■□□□□ 0.67
CSF1P09603 AC074183.2-201ENST00000623112 922 ntBASIC19.23■□□□□ 0.67
CSF1P09603 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.23■□□□□ 0.67
CSF1P09603 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.23■□□□□ 0.67
CSF1P09603 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSF1P09603 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.23■□□□□ 0.67
CSF1P09603 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSF1P09603 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.22■□□□□ 0.67
CSF1P09603 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.22■□□□□ 0.67
CSF1P09603 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.22■□□□□ 0.67
CSF1P09603 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSF1P09603 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSF1P09603 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSF1P09603 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CSF1P09603 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSF1P09603 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CSF1P09603 AC093536.1-201ENST00000569153 554 ntBASIC19.22■□□□□ 0.67
CSF1P09603 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSF1P09603 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSF1P09603 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSF1P09603 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSF1P09603 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSF1P09603 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSF1P09603 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.21■□□□□ 0.67
CSF1P09603 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSF1P09603 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CSF1P09603 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.21■□□□□ 0.67
CSF1P09603 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSF1P09603 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSF1P09603 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSF1P09603 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.21■□□□□ 0.67
CSF1P09603 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSF1P09603 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.21■□□□□ 0.67
CSF1P09603 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms