Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AL136162.1-201ENST00000607711 1078 ntBASIC22.92■■□□□ 1.26
MT-CO1P00395 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
MT-CO1P00395 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MT-CO1P00395 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MT-CO1P00395 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.91■■□□□ 1.26
MT-CO1P00395 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MT-CO1P00395 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
MT-CO1P00395 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.91■■□□□ 1.26
MT-CO1P00395 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.91■■□□□ 1.26
MT-CO1P00395 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MT-CO1P00395 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
MT-CO1P00395 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MT-CO1P00395 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MT-CO1P00395 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MT-CO1P00395 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
MT-CO1P00395 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
MT-CO1P00395 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MT-CO1P00395 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MT-CO1P00395 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
MT-CO1P00395 AC024257.2-201ENST00000549699 147 ntBASIC22.9■■□□□ 1.26
MT-CO1P00395 AC106739.1-201ENST00000617035 715 ntBASIC22.9■■□□□ 1.26
MT-CO1P00395 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.9■■□□□ 1.26
MT-CO1P00395 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
MT-CO1P00395 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
MT-CO1P00395 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MT-CO1P00395 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
MT-CO1P00395 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
MT-CO1P00395 SYT6-210ENST00000641643 1587 ntBASIC22.89■■□□□ 1.26
MT-CO1P00395 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.89■■□□□ 1.26
MT-CO1P00395 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.89■■□□□ 1.26
MT-CO1P00395 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.89■■□□□ 1.26
MT-CO1P00395 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
MT-CO1P00395 SERBP1P1-201ENST00000396021 1160 ntBASIC22.89■■□□□ 1.25
MT-CO1P00395 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MT-CO1P00395 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
MT-CO1P00395 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MT-CO1P00395 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MT-CO1P00395 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
MT-CO1P00395 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
MT-CO1P00395 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
MT-CO1P00395 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
MT-CO1P00395 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
MT-CO1P00395 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
MT-CO1P00395 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.88■■□□□ 1.25
MT-CO1P00395 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.88■■□□□ 1.25
MT-CO1P00395 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.88■■□□□ 1.25
MT-CO1P00395 AC241377.3-202ENST00000626088 1088 ntBASIC22.88■■□□□ 1.25
MT-CO1P00395 AC241585.3-202ENST00000628937 1088 ntBASIC22.88■■□□□ 1.25
MT-CO1P00395 AC245100.8-202ENST00000629247 1058 ntBASIC22.88■■□□□ 1.25
MT-CO1P00395 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MT-CO1P00395 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
MT-CO1P00395 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.88■■□□□ 1.25
MT-CO1P00395 AC135279.3-201ENST00000610945 1311 ntBASIC22.87■■□□□ 1.25
MT-CO1P00395 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MT-CO1P00395 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.87■■□□□ 1.25
MT-CO1P00395 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MT-CO1P00395 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.87■■□□□ 1.25
MT-CO1P00395 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.87■■□□□ 1.25
MT-CO1P00395 DUX4L19-201ENST00000557448 1267 ntBASIC22.87■■□□□ 1.25
MT-CO1P00395 AC092171.4-201ENST00000609130 632 ntBASIC22.87■■□□□ 1.25
MT-CO1P00395 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.87■■□□□ 1.25
MT-CO1P00395 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MT-CO1P00395 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MT-CO1P00395 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.87■■□□□ 1.25
MT-CO1P00395 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MT-CO1P00395 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MT-CO1P00395 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
MT-CO1P00395 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
MT-CO1P00395 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
MT-CO1P00395 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.86■■□□□ 1.25
MT-CO1P00395 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
MT-CO1P00395 AC005837.3-201ENST00000612163 286 ntBASIC22.86■■□□□ 1.25
MT-CO1P00395 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MT-CO1P00395 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
MT-CO1P00395 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MT-CO1P00395 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
MT-CO1P00395 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-CO1P00395 AC019069.1-201ENST00000610008 1333 ntBASIC22.85■■□□□ 1.25
MT-CO1P00395 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-CO1P00395 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
MT-CO1P00395 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
MT-CO1P00395 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
MT-CO1P00395 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.85■■□□□ 1.25
MT-CO1P00395 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.85■■□□□ 1.25
MT-CO1P00395 AC133561.4-201ENST00000566112 224 ntBASIC22.85■■□□□ 1.25
MT-CO1P00395 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.85■■□□□ 1.25
MT-CO1P00395 AC009086.3-201ENST00000623486 1008 ntBASIC22.85■■□□□ 1.25
MT-CO1P00395 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
MT-CO1P00395 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-CO1P00395 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-CO1P00395 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-CO1P00395 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-CO1P00395 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-CO1P00395 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
MT-CO1P00395 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
MT-CO1P00395 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.84■■□□□ 1.25
MT-CO1P00395 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
MT-CO1P00395 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.83■■□□□ 1.25
MT-CO1P00395 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
MT-CO1P00395 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms