Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.55■□□□□ 0.41e-7■■■■■ 36.5
DKC1O60832 PDCD6-203ENST00000505526 1484 ntTSL 1 (best)17.39■□□□□ 0.371e-7■■■■■ 36.5
DKC1O60832 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.18■□□□□ 0.344e-8■■■■■ 36.5
DKC1O60832 CTNS-209ENST00000574776 565 ntTSL 417.04■□□□□ 0.324e-15■■■■■ 36.5
DKC1O60832 CTNS-206ENST00000488623 537 ntTSL 316.86■□□□□ 0.294e-15■■■■■ 36.5
DKC1O60832 RPS9-209ENST00000448962 2384 ntTSL 216.65■□□□□ 0.264e-8■■■■■ 36.5
DKC1O60832 HNF1A-210ENST00000543255 762 ntTSL 516.64■□□□□ 0.254e-8■■■■■ 36.5
DKC1O60832 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.254e-8■■■■■ 36.5
DKC1O60832 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.194e-8■■■■■ 36.5
DKC1O60832 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.124e-8■■■■■ 36.5
DKC1O60832 RPS9-206ENST00000436445 752 ntTSL 215.83■□□□□ 0.124e-8■■■■■ 36.5
DKC1O60832 RPS9-208ENST00000445961 944 ntTSL 515.83■□□□□ 0.124e-8■■■■■ 36.5
DKC1O60832 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.73■□□□□ 0.114e-8■■■■■ 36.5
DKC1O60832 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.59■□□□□ 0.094e-15■■■■■ 36.5
DKC1O60832 RPS9-211ENST00000484121 897 ntTSL 215.2■□□□□ 0.024e-8■■■■■ 36.5
DKC1O60832 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC15.06■□□□□ 04e-8■■■■■ 36.5
DKC1O60832 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC14.99□□□□□ -0.014e-8■■■■■ 36.5
DKC1O60832 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.011e-7■■■■■ 36.5
DKC1O60832 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.96□□□□□ -0.011e-7■■■■■ 36.5
DKC1O60832 NUMA1-203ENST00000366394 539 ntAPPRIS ALT2 TSL 514.87□□□□□ -0.034e-8■■■■■ 36.5
DKC1O60832 ABCC6-203ENST00000574094 2260 ntTSL 514.87□□□□□ -0.034e-8■■■■■ 36.5
DKC1O60832 PPFIBP2-211ENST00000529021 602 ntTSL 414.65□□□□□ -0.064e-8■■■■■ 36.5
DKC1O60832 NUMA1-223ENST00000542977 2766 ntAPPRIS ALT2 TSL 214.33□□□□□ -0.124e-8■■■■■ 36.5
DKC1O60832 NUMA1-224ENST00000543009 874 ntAPPRIS ALT2 TSL 314.3□□□□□ -0.124e-8■■■■■ 36.5
DKC1O60832 RPS9-213ENST00000626547 476 ntTSL 2 BASIC14.28□□□□□ -0.124e-8■■■■■ 36.5
DKC1O60832 NUMA1-226ENST00000543937 911 ntAPPRIS ALT2 TSL 514.27□□□□□ -0.134e-8■■■■■ 36.5
DKC1O60832 NUMA1-231ENST00000546131 280 ntAPPRIS ALT2 TSL 514.27□□□□□ -0.134e-8■■■■■ 36.5
DKC1O60832 NUMA1-209ENST00000535111 582 ntAPPRIS ALT2 TSL 314.12□□□□□ -0.154e-8■■■■■ 36.5
DKC1O60832 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.154e-8■■■■■ 36.5
DKC1O60832 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.174e-8■■■■■ 36.5
DKC1O60832 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.174e-15■■■■■ 36.5
DKC1O60832 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.254e-8■■■■■ 36.5
DKC1O60832 NUMA1-218ENST00000540843 1969 ntTSL 213.44□□□□□ -0.264e-8■■■■■ 36.5
DKC1O60832 CTNS-205ENST00000467663 590 ntTSL 313.37□□□□□ -0.274e-15■■■■■ 36.5
DKC1O60832 CTNS-208ENST00000574218 581 ntTSL 513.36□□□□□ -0.274e-15■■■■■ 36.5
DKC1O60832 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC13.17□□□□□ -0.34e-8■■■■■ 36.5
DKC1O60832 PPFIBP2-207ENST00000527790 625 ntTSL 313.11□□□□□ -0.314e-8■■■■■ 36.5
DKC1O60832 TXNDC16-201ENST00000281741 4564 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.314e-8■■■■■ 36.5
DKC1O60832 HNF1A-204ENST00000535955 434 ntTSL 1 (best)12.98□□□□□ -0.334e-8■■■■■ 36.5
DKC1O60832 NUMA1-215ENST00000537930 582 ntAPPRIS ALT2 TSL 512.91□□□□□ -0.344e-8■■■■■ 36.5
DKC1O60832 AMBRA1-211ENST00000533727 4817 ntTSL 1 (best) BASIC12.89□□□□□ -0.354e-8■■■■■ 36.5
DKC1O60832 NUMA1-212ENST00000536119 1686 ntTSL 212.77□□□□□ -0.364e-8■■■■■ 36.5
DKC1O60832 NUMA1-208ENST00000535087 606 ntAPPRIS ALT2 TSL 412.64□□□□□ -0.394e-8■■■■■ 36.5
DKC1O60832 NUMA1-222ENST00000541719 583 ntAPPRIS ALT2 TSL 512.64□□□□□ -0.394e-8■■■■■ 36.5
DKC1O60832 NUMA1-221ENST00000541641 589 ntAPPRIS ALT2 TSL 512.53□□□□□ -0.44e-8■■■■■ 36.5
DKC1O60832 NUMA1-210ENST00000535838 582 ntAPPRIS ALT2 TSL 312.39□□□□□ -0.434e-8■■■■■ 36.5
DKC1O60832 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.454e-8■■■■■ 36.5
DKC1O60832 AMBRA1-202ENST00000458649 5351 ntTSL 2 BASIC12.2□□□□□ -0.464e-8■■■■■ 36.5
DKC1O60832 PPFIBP2-224ENST00000533792 3003 ntTSL 1 (best) BASIC11.99□□□□□ -0.494e-8■■■■■ 36.5
DKC1O60832 PDCD6-210ENST00000513582 3500 ntTSL 211.75□□□□□ -0.531e-7■■■■■ 36.5
DKC1O60832 DSCAML1-201ENST00000321322 6899 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.564e-8■■■■■ 36.5
DKC1O60832 NUMA1-204ENST00000368959 583 ntAPPRIS ALT2 TSL 311.52□□□□□ -0.574e-8■■■■■ 36.5
DKC1O60832 NUMA1-207ENST00000534987 2211 ntTSL 211.35□□□□□ -0.594e-8■■■■■ 36.5
DKC1O60832 NUMA1-228ENST00000544238 792 ntAPPRIS ALT2 TSL 310.98□□□□□ -0.654e-8■■■■■ 36.5
DKC1O60832 NUMA1-214ENST00000537905 598 ntTSL 310.92□□□□□ -0.664e-8■■■■■ 36.5
DKC1O60832 NUMA1-201ENST00000351960 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.744e-8■■■■■ 36.5
DKC1O60832 NUMA1-211ENST00000535947 576 ntAPPRIS ALT2 TSL 410.35□□□□□ -0.754e-8■■■■■ 36.5
DKC1O60832 PPFIBP2-213ENST00000529575 780 ntTSL 39.48□□□□□ -0.894e-8■■■■■ 36.5
DKC1O60832 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC9.38□□□□□ -0.914e-8■■■■■ 36.5
DKC1O60832 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.934e-8■■■■■ 36.5
DKC1O60832 PDCD6-205ENST00000507473 486 ntTSL 38.58□□□□□ -1.041e-7■■■■■ 36.5
DKC1O60832 PPFIBP2-203ENST00000524548 407 ntTSL 38.11□□□□□ -1.114e-8■■■■■ 36.5
DKC1O60832 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.72□□□□□ -1.174e-8■■■■■ 36.5
DKC1O60832 PPFIBP2-204ENST00000525597 577 ntTSL 47.67□□□□□ -1.184e-8■■■■■ 36.5
DKC1O60832 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.44□□□□□ -1.224e-8■■■■■ 36.5
DKC1O60832 CAMKMT-206ENST00000428993 526 ntTSL 36.88□□□□□ -1.314e-8■■■■■ 36.5
DKC1O60832 CTNS-210ENST00000576979 548 ntTSL 56.03□□□□□ -1.444e-15■■■■■ 36.5
DKC1O60832 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.16□□□□□ -1.584e-8■■■■■ 36.5
DKC1O60832 DONSON-206ENST00000439593 528 ntTSL 34.33□□□□□ -1.724e-8■■■■■ 36.5
DKC1O60832 RPS5-206ENST00000598807 970 ntTSL 219.25■□□□□ 0.671e-9■■■■■ 36.5
DKC1O60832 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.581e-9■■■■■ 36.5
DKC1O60832 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.411e-9■■■■■ 36.5
DKC1O60832 RPS5-203ENST00000596314 718 ntTSL 517.29■□□□□ 0.361e-9■■■■■ 36.5
DKC1O60832 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.171e-9■■■■■ 36.5
DKC1O60832 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.88□□□□□ -0.031e-9■■■■■ 36.5
DKC1O60832 RPS5-205ENST00000598495 800 ntTSL 3 BASIC14.29□□□□□ -0.121e-9■■■■■ 36.5
DKC1O60832 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.1■■□□□ 1.452e-7■■■■■ 36.4
DKC1O60832 ADARB1-203ENST00000389861 5031 ntTSL 1 (best)24.1■■□□□ 1.452e-7■■■■■ 36.4
DKC1O60832 ADARB1-212ENST00000496664 5033 ntTSL 1 (best)24.1■■□□□ 1.452e-7■■■■■ 36.4
DKC1O60832 ADARB1-211ENST00000492414 4913 ntTSL 1 (best)23■■□□□ 1.272e-7■■■■■ 36.4
DKC1O60832 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.832e-7■■■■■ 36.4
DKC1O60832 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.35■□□□□ 0.532e-7■■■■■ 36.4
DKC1O60832 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.414e-7■■■■■ 36.2
DKC1O60832 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.074e-7■■■■■ 36.2
DKC1O60832 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC12.9□□□□□ -0.344e-7■■■■■ 36.2
DKC1O60832 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC12.69□□□□□ -0.384e-7■■■■■ 36.2
DKC1O60832 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.311e-6■■■■■ 36.2
DKC1O60832 UBE4B-210ENST00000488228 560 ntTSL 312.35□□□□□ -0.431e-6■■■■■ 36.2
DKC1O60832 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.8□□□□□ -11e-6■■■■■ 36.2
DKC1O60832 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.942e-11■■■■■ 36.2
DKC1O60832 CSNK2A2-205ENST00000566813 1569 ntTSL 59.53□□□□□ -0.882e-11■■■■■ 36.2
DKC1O60832 RGS12-210ENST00000506631 1530 ntTSL 1 (best)27.1■■□□□ 1.931e-6■■■■■ 36.2
DKC1O60832 RGS12-224ENST00000514268 2751 ntTSL 519.85■□□□□ 0.771e-6■■■■■ 36.2
DKC1O60832 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.661e-6■■■■■ 36.2
DKC1O60832 RGS12-222ENST00000513784 710 ntTSL 218.85■□□□□ 0.611e-6■■■■■ 36.2
DKC1O60832 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.031e-6■■■■■ 36.2
DKC1O60832 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.041e-6■■■■■ 36.2
DKC1O60832 RGS12-219ENST00000511805 552 ntTSL 1 (best)5.64□□□□□ -1.511e-6■■■■■ 36.2
DKC1O60832 ZMYND8-202ENST00000311275 5362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.481e-7■■■■■ 36.1
DKC1O60832 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.551e-7■■■■■ 36.1
Retrieved 100 of 8,567 protein–RNA pairs in 180.6 ms