RNA–Protein interactions for RNA: ENST00000614778.4

PDCD6-212, Transcript of programmed cell death 6, humanhuman

TSL 2 BASIC

Gene PDCD6, Length 1,050 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-212ENST00000614778 NISCHQ9Y2I1 1504 aa38.5■■■■□ 3.75
PDCD6-212ENST00000614778 CCDC180Q9P1Z9 1646 aa34.26■■■■□ 3.08
PDCD6-212ENST00000614778 ABCC9O60706 1549 aa33.74■■■□□ 2.99
PDCD6-212ENST00000614778 RB1CC1Q8TDY2 1594 aa32.32■■■□□ 2.77
PDCD6-212ENST00000614778 NACADO15069 1562 aa32.24■■■□□ 2.75
PDCD6-212ENST00000614778 DCAF8L2P0C7V8 631 aa32.23■■■□□ 2.75
PDCD6-212ENST00000614778 ZCCHC6Q5VYS8 1495 aaKnown RBP32.03■■■□□ 2.72
PDCD6-212ENST00000614778 MYO15BQ96JP2 1530 aa31.98■■■□□ 2.71
PDCD6-212ENST00000614778 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
PDCD6-212ENST00000614778 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
PDCD6-212ENST00000614778 PABPN1Q86U42 306 aaKnown RBP eCLIP31.52■■■□□ 2.64
PDCD6-212ENST00000614778 BICRAQ9NZM4 1560 aa31.44■■■□□ 2.62
PDCD6-212ENST00000614778 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
PDCD6-212ENST00000614778 DNAJC5BQ9UF47 199 aa31.18■■■□□ 2.58
PDCD6-212ENST00000614778 SHROOM4Q9ULL8 1493 aa30.95■■■□□ 2.55
PDCD6-212ENST00000614778 EIF4G1Q04637 1599 aaKnown RBP30.58■■■□□ 2.49
PDCD6-212ENST00000614778 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.47
PDCD6-212ENST00000614778 CECR2Q9BXF3 1484 aa30.31■■■□□ 2.44
PDCD6-212ENST00000614778 SMARCA4P51532 1647 aa29.92■■■□□ 2.38
PDCD6-212ENST00000614778 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
PDCD6-212ENST00000614778 ATAD2BQ9ULI0 1458 aa29.8■■■□□ 2.36
PDCD6-212ENST00000614778 NCAPD3P42695 1498 aa29.78■■■□□ 2.36
PDCD6-212ENST00000614778 MROH2BQ7Z745 1585 aa29.71■■■□□ 2.35
PDCD6-212ENST00000614778 SMARCA2P51531 1590 aa29.7■■■□□ 2.35
PDCD6-212ENST00000614778 HMGXB3Q12766 1538 aa29.61■■■□□ 2.33
PDCD6-212ENST00000614778 PEG3Q9GZU2 1588 aa29.6■■■□□ 2.33
PDCD6-212ENST00000614778 BAZ1BQ9UIG0 1483 aaKnown RBP29.51■■■□□ 2.31
PDCD6-212ENST00000614778 WIZO95785 1651 aa29.39■■■□□ 2.3
PDCD6-212ENST00000614778 RSF1Q96T23 1441 aaPredicted RBP29.28■■■□□ 2.28
PDCD6-212ENST00000614778 NESP48681 1621 aa29.19■■■□□ 2.26
PDCD6-212ENST00000614778 ERCC6Q03468 1493 aa29.04■■■□□ 2.24
PDCD6-212ENST00000614778 TOP2AP11388 1531 aaKnown RBP29.01■■■□□ 2.23
PDCD6-212ENST00000614778 LAMC3Q9Y6N6 1575 aa29■■■□□ 2.23
PDCD6-212ENST00000614778 CADPSQ9ULU8 1353 aa28.9■■■□□ 2.22
PDCD6-212ENST00000614778 KIF21AQ7Z4S6 1674 aa28.81■■■□□ 2.2
PDCD6-212ENST00000614778 PDS5BQ9NTI5 1447 aa28.79■■■□□ 2.2
PDCD6-212ENST00000614778 CUX2O14529 1486 aa28.78■■■□□ 2.2
PDCD6-212ENST00000614778 THOC2Q8NI27 1593 aaKnown RBP28.75■■■□□ 2.19
PDCD6-212ENST00000614778 CFTRP13569 1480 aa28.71■■■□□ 2.19
PDCD6-212ENST00000614778 CCDC88BA6NC98 1476 aa28.7■■■□□ 2.18
PDCD6-212ENST00000614778 FANCD2Q9BXW9 1451 aa28.58■■■□□ 2.17
PDCD6-212ENST00000614778 CEP164Q9UPV0 1460 aa28.54■■■□□ 2.16
PDCD6-212ENST00000614778 MRC2Q9UBG0 1479 aa28.53■■■□□ 2.16
PDCD6-212ENST00000614778 PRDM2Q13029 1718 aa28.48■■■□□ 2.15
PDCD6-212ENST00000614778 WDR62O43379 1518 aa28.47■■■□□ 2.15
PDCD6-212ENST00000614778 SUPT5HO00267 1087 aaKnown RBP28.43■■■□□ 2.14
PDCD6-212ENST00000614778 URB2Q14146 1524 aaKnown RBP28.34■■■□□ 2.13
PDCD6-212ENST00000614778 DNAJC5Q9H3Z4 198 aa28.12■■■□□ 2.09
PDCD6-212ENST00000614778 TOPBP1Q92547 1522 aa28.12■■■□□ 2.09
PDCD6-212ENST00000614778 DNMBPQ6XZF7 1577 aa28.05■■■□□ 2.08
PDCD6-212ENST00000614778 ABCC8Q09428 1581 aa28.03■■■□□ 2.08
PDCD6-212ENST00000614778 IFT140Q96RY7 1462 aa27.94■■■□□ 2.06
PDCD6-212ENST00000614778 ZNF608Q9ULD9 1512 aaPredicted RBP27.91■■■□□ 2.06
PDCD6-212ENST00000614778 CUX1P39880 1505 aa27.87■■■□□ 2.05
PDCD6-212ENST00000614778 POLA1P09884 1462 aaPredicted RBP27.87■■■□□ 2.05
PDCD6-212ENST00000614778 TARBP1Q13395 1621 aaKnown RBP27.84■■■□□ 2.05
PDCD6-212ENST00000614778 FGD5Q6ZNL6 1462 aa27.78■■■□□ 2.04
PDCD6-212ENST00000614778 RAD54L2Q9Y4B4 1467 aa27.78■■■□□ 2.04
PDCD6-212ENST00000614778 EIF4G3O43432 1585 aaKnown RBP27.76■■■□□ 2.03
PDCD6-212ENST00000614778 SOGA1O94964 1423 aa27.74■■■□□ 2.03
PDCD6-212ENST00000614778 AQRO60306 1485 aaKnown RBP eCLIP27.71■■■□□ 2.031e-6■■■■□ 25.2
PDCD6-212ENST00000614778 TDRD9Q8NDG6 1382 aaKnown RBP27.63■■■□□ 2.01
PDCD6-212ENST00000614778 WRNQ14191 1432 aaPredicted RBP eCLIP27.58■■■□□ 2.015e-6■■■■■ 33.4
PDCD6-212ENST00000614778 SYNJ1O43426 1573 aa27.58■■■□□ 2.01
PDCD6-212ENST00000614778 WDR97A6NE52 1622 aa27.57■■■□□ 2
PDCD6-212ENST00000614778 OSCARQ8IYS5 282 aa27.56■■■□□ 2
PDCD6-212ENST00000614778 TOP2BQ02880 1626 aa27.56■■■□□ 2
PDCD6-212ENST00000614778 BIVM-ERCC5R4GMW8 1640 aa27.56■■■□□ 2
PDCD6-212ENST00000614778 ABCA10Q8WWZ4 1543 aa27.48■■□□□ 1.99
PDCD6-212ENST00000614778 CHD1O14646 1710 aa27.46■■□□□ 1.99
PDCD6-212ENST00000614778 SNAPC4Q5SXM2 1469 aa27.44■■□□□ 1.98
PDCD6-212ENST00000614778 ABCA5Q8WWZ7 1642 aa27.41■■□□□ 1.98
PDCD6-212ENST00000614778 GRIN2BQ13224 1484 aa27.41■■□□□ 1.98
PDCD6-212ENST00000614778 GAPVD1Q14C86 1478 aa27.41■■□□□ 1.98
PDCD6-212ENST00000614778 PBRM1Q86U86 1689 aa27.39■■□□□ 1.97
PDCD6-212ENST00000614778 FBLN2P98095 1184 aa27.37■■□□□ 1.97
PDCD6-212ENST00000614778 MAGI1Q96QZ7 1491 aaPredicted RBP27.35■■□□□ 1.97
PDCD6-212ENST00000614778 SYNJ2O15056 1496 aa27.25■■□□□ 1.95
PDCD6-212ENST00000614778 CHMP7Q8WUX9 453 aaPredicted RBP27.25■■□□□ 1.95
PDCD6-212ENST00000614778 RIMBP3CA6NJZ7 1639 aa27.19■■□□□ 1.94
PDCD6-212ENST00000614778 RIMBP3BA6NNM3 1639 aa27.19■■□□□ 1.94
PDCD6-212ENST00000614778 RIMBP3Q9UFD9 1639 aa27.19■■□□□ 1.94
PDCD6-212ENST00000614778 ARHGEF11O15085 1522 aa27.16■■□□□ 1.94
PDCD6-212ENST00000614778 ADAMTS12P58397 1594 aa27.16■■□□□ 1.94
PDCD6-212ENST00000614778 TRIM41Q8WV44 630 aa27.15■■□□□ 1.94
PDCD6-212ENST00000614778 CLASP1Q7Z460 1538 aa27.14■■□□□ 1.94
PDCD6-212ENST00000614778 ERICH3Q5RHP9 1530 aa27.13■■□□□ 1.93
PDCD6-212ENST00000614778 GRIN2AQ12879 1464 aa27.08■■□□□ 1.93
PDCD6-212ENST00000614778 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
PDCD6-212ENST00000614778 KIF27Q86VH2 1401 aa27■■□□□ 1.91
PDCD6-212ENST00000614778 CEP170Q5SW79 1584 aa26.99■■□□□ 1.91
PDCD6-212ENST00000614778 NUP160Q12769 1436 aa26.97■■□□□ 1.91
PDCD6-212ENST00000614778 IGF1RP08069 1367 aa26.96■■□□□ 1.91
PDCD6-212ENST00000614778 ARAP1Q96P48 1450 aa26.95■■□□□ 1.91
PDCD6-212ENST00000614778 CYB5RLQ6IPT4 315 aa26.92■■□□□ 1.9
PDCD6-212ENST00000614778 CUL7Q14999 1698 aa26.85■■□□□ 1.89
PDCD6-212ENST00000614778 RUSC2Q8N2Y8 1516 aa26.82■■□□□ 1.88
PDCD6-212ENST00000614778 ERCC6L2Q5T890 1561 aa26.81■■□□□ 1.88
PDCD6-212ENST00000614778 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
PDCD6-212ENST00000614778 CARMIL1Q5VZK9 1371 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms