Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 AC005703.6-201ENST00000623265 1329 ntBASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 AC009299.2-201ENST00000482477 511 ntBASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 AC092028.1-203ENST00000608262 953 ntBASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.31■□□□□ 0.52
SAA2-SAA4A0A096LPE2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 AL451085.2-201ENST00000605085 799 ntBASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 MIR4787-201ENST00000607364 84 ntBASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SAA2-SAA4A0A096LPE2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
SAA2-SAA4A0A096LPE2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.29■□□□□ 0.52
SAA2-SAA4A0A096LPE2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SAA2-SAA4A0A096LPE2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SAA2-SAA4A0A096LPE2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SAA2-SAA4A0A096LPE2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
SAA2-SAA4A0A096LPE2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SAA2-SAA4A0A096LPE2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SAA2-SAA4A0A096LPE2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SAA2-SAA4A0A096LPE2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SAA2-SAA4A0A096LPE2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SAA2-SAA4A0A096LPE2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.29■□□□□ 0.52
SAA2-SAA4A0A096LPE2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SAA2-SAA4A0A096LPE2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SAA2-SAA4A0A096LPE2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 AC239859.2-201ENST00000444165 318 ntBASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 MTDHP2-201ENST00000601468 714 ntBASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 C1orf229-201ENST00000623686 2258 ntBASIC18.28■□□□□ 0.52
SAA2-SAA4A0A096LPE2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SAA2-SAA4A0A096LPE2 AL353803.4-201ENST00000565882 1934 ntBASIC18.27■□□□□ 0.52
SAA2-SAA4A0A096LPE2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SAA2-SAA4A0A096LPE2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.27■□□□□ 0.52
SAA2-SAA4A0A096LPE2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SAA2-SAA4A0A096LPE2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SAA2-SAA4A0A096LPE2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SAA2-SAA4A0A096LPE2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SAA2-SAA4A0A096LPE2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SAA2-SAA4A0A096LPE2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SAA2-SAA4A0A096LPE2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SAA2-SAA4A0A096LPE2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SAA2-SAA4A0A096LPE2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SAA2-SAA4A0A096LPE2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SAA2-SAA4A0A096LPE2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.26■□□□□ 0.51
SAA2-SAA4A0A096LPE2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SAA2-SAA4A0A096LPE2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.26■□□□□ 0.51
SAA2-SAA4A0A096LPE2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.26■□□□□ 0.51
SAA2-SAA4A0A096LPE2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SAA2-SAA4A0A096LPE2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
SAA2-SAA4A0A096LPE2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SAA2-SAA4A0A096LPE2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.25■□□□□ 0.51
SAA2-SAA4A0A096LPE2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SAA2-SAA4A0A096LPE2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SAA2-SAA4A0A096LPE2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
SAA2-SAA4A0A096LPE2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SAA2-SAA4A0A096LPE2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SAA2-SAA4A0A096LPE2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SAA2-SAA4A0A096LPE2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SAA2-SAA4A0A096LPE2 AC144652.1-201ENST00000609974 1624 ntBASIC18.24■□□□□ 0.51
SAA2-SAA4A0A096LPE2 TSPY9P-201ENST00000440215 945 ntBASIC18.24■□□□□ 0.51
SAA2-SAA4A0A096LPE2 TSPY11P-201ENST00000442607 1045 ntBASIC18.24■□□□□ 0.51
SAA2-SAA4A0A096LPE2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.24■□□□□ 0.51
SAA2-SAA4A0A096LPE2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SAA2-SAA4A0A096LPE2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SAA2-SAA4A0A096LPE2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SAA2-SAA4A0A096LPE2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms