Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 ERF2YLR246W 1080 nt11.98□□□□□ -0.49
VPS35P34110 WSC2YNL283C 1512 nt11.96□□□□□ -0.5
VPS35P34110 YJL225CYJL225C 5277 nt11.95□□□□□ -0.5
VPS35P34110 YFL067WYFL067W 528 nt11.94□□□□□ -0.5
VPS35P34110 DDR2YOL052C-A 186 nt11.94□□□□□ -0.5
VPS35P34110 TRM5YHR070W 1500 nt11.94□□□□□ -0.5
VPS35P34110 STB1YNL309W 1263 nt11.9□□□□□ -0.5
VPS35P34110 ATF2YGR177C 1608 nt11.87□□□□□ -0.51
VPS35P34110 SPC25YER018C 666 nt11.87□□□□□ -0.51
VPS35P34110 CRR1YLR213C 1269 nt11.87□□□□□ -0.51
VPS35P34110 UME6YDR207C 2511 nt11.86□□□□□ -0.51
VPS35P34110 GPI16YHR188C 1833 nt11.86□□□□□ -0.51
VPS35P34110 YDR524C-BYDR524C-B 201 nt11.85□□□□□ -0.51
VPS35P34110 YFR018CYFR018C 1092 nt11.85□□□□□ -0.51
VPS35P34110 YDL086C-AYDL086C-A 435 nt11.83□□□□□ -0.52
VPS35P34110 CCT4YDL143W 1587 nt11.82□□□□□ -0.52
VPS35P34110 RRT5YFR032C 870 nt11.81□□□□□ -0.52
VPS35P34110 SWC5YBR231C 912 nt11.8□□□□□ -0.52
VPS35P34110 HEM12YDR047W 1089 nt11.79□□□□□ -0.52
VPS35P34110 YLR415CYLR415C 339 nt11.79□□□□□ -0.52
VPS35P34110 YGR139WYGR139W 339 nt11.78□□□□□ -0.52
VPS35P34110 YFL054CYFL054C 1941 nt11.76□□□□□ -0.53
VPS35P34110 LYS4YDR234W 2082 nt11.75□□□□□ -0.53
VPS35P34110 FEN2YCR028C 1539 nt11.75□□□□□ -0.53
VPS35P34110 ANP1YEL036C 1503 nt11.75□□□□□ -0.53
VPS35P34110 VPS60YDR486C 690 nt11.74□□□□□ -0.53
VPS35P34110 BDH1YAL060W 1149 nt11.74□□□□□ -0.53
VPS35P34110 SNG1YGR197C 1644 nt11.74□□□□□ -0.53
VPS35P34110 PEX25YPL112C 1185 nt11.72□□□□□ -0.53
VPS35P34110 PAU16YKL224C 372 nt11.7□□□□□ -0.54
VPS35P34110 YSP3YOR003W 1437 nt11.69□□□□□ -0.54
VPS35P34110 MIC10YCL057C-A 294 nt11.68□□□□□ -0.54
VPS35P34110 SPT8YLR055C 1809 nt11.67□□□□□ -0.54
VPS35P34110 YFL015W-AYFL015W-A 318 nt11.67□□□□□ -0.54
VPS35P34110 PRE6YOL038W 765 nt11.67□□□□□ -0.54
VPS35P34110 RDN37-1RDN37-1 5354 nt11.66□□□□□ -0.54
VPS35P34110 RDN37-2RDN37-2 5354 nt11.66□□□□□ -0.54
VPS35P34110 YNL115CYNL115C 1935 nt11.66□□□□□ -0.54
VPS35P34110 YFL066CYFL066C 1179 nt11.65□□□□□ -0.54
VPS35P34110 ALG3YBL082C 1377 nt11.65□□□□□ -0.55
VPS35P34110 YIR016WYIR016W 798 nt11.63□□□□□ -0.55
VPS35P34110 BNA2YJR078W 1362 nt11.63□□□□□ -0.55
VPS35P34110 YHR056W-AYHR056W-A 435 nt11.59□□□□□ -0.55
VPS35P34110 RAX1YOR301W 1308 nt11.57□□□□□ -0.56
VPS35P34110 VPS75YNL246W 795 nt11.56□□□□□ -0.56
VPS35P34110 TIM17YJL143W 477 nt11.54□□□□□ -0.56
VPS35P34110 GLK1YCL040W 1503 nt11.52□□□□□ -0.57
VPS35P34110 SWE1YJL187C 2460 nt11.52□□□□□ -0.57
VPS35P34110 NAT4YMR069W 858 nt11.51□□□□□ -0.57
VPS35P34110 MIC12YBR262C 321 nt11.48□□□□□ -0.57
VPS35P34110 PAU7YAR020C 168 nt11.46□□□□□ -0.57
VPS35P34110 HHO1YPL127C 777 nt11.45□□□□□ -0.58
VPS35P34110 XDJ1YLR090W 1380 nt11.44□□□□□ -0.58
VPS35P34110 YGR201CYGR201C 678 nt11.42□□□□□ -0.58
VPS35P34110 SHM2YLR058C 1410 nt11.42□□□□□ -0.58
VPS35P34110 GDH3YAL062W 1374 nt11.4□□□□□ -0.59
VPS35P34110 THI74YDR438W 1113 nt11.39□□□□□ -0.59
VPS35P34110 MIR1YJR077C 936 nt11.39□□□□□ -0.59
VPS35P34110 MSF1YPR047W 1410 nt11.37□□□□□ -0.59
VPS35P34110 BOR1YNL275W 1731 nt11.36□□□□□ -0.59
VPS35P34110 MCH5YOR306C 1566 nt11.33□□□□□ -0.6
VPS35P34110 GOR1YNL274C 1053 nt11.3□□□□□ -0.6
VPS35P34110 SGT2YOR007C 1041 nt11.3□□□□□ -0.6
VPS35P34110 AVT6YER119C 1347 nt11.3□□□□□ -0.6
VPS35P34110 NIT1YIL164C 600 nt11.28□□□□□ -0.6
VPS35P34110 CCA1YER168C 1641 nt11.27□□□□□ -0.61
VPS35P34110 DAT1YML113W 747 nt11.26□□□□□ -0.61
VPS35P34110 SHB17YKR043C 816 nt11.25□□□□□ -0.61
VPS35P34110 UBA4YHR111W 1323 nt11.25□□□□□ -0.61
VPS35P34110 SBA1YKL117W 651 nt11.23□□□□□ -0.61
VPS35P34110 HSP60YLR259C 1719 nt11.23□□□□□ -0.61
VPS35P34110 YSR3YKR053C 1215 nt11.21□□□□□ -0.61
VPS35P34110 YGL034CYGL034C 366 nt11.18□□□□□ -0.62
VPS35P34110 FUR4YBR021W 1902 nt11.17□□□□□ -0.62
VPS35P34110 YCR102CYCR102C 1107 nt11.17□□□□□ -0.62
VPS35P34110 AGP1YCL025C 1902 nt11.16□□□□□ -0.62
VPS35P34110 YDR010CYDR010C 333 nt11.16□□□□□ -0.62
VPS35P34110 YCR087WYCR087W 516 nt11.15□□□□□ -0.62
VPS35P34110 RET2YFR051C 1641 nt11.14□□□□□ -0.63
VPS35P34110 DUS1YML080W 1272 nt11.14□□□□□ -0.63
VPS35P34110 PHO89YBR296C 1725 nt11.12□□□□□ -0.63
VPS35P34110 CSM2YIL132C 642 nt11.1□□□□□ -0.63
VPS35P34110 XYL2YLR070C 1071 nt11.09□□□□□ -0.63
VPS35P34110 DUT1YBR252W 444 nt11.09□□□□□ -0.63
VPS35P34110 MRP20YDR405W 792 nt11.06□□□□□ -0.64
VPS35P34110 MET8YBR213W 825 nt11.06□□□□□ -0.64
VPS35P34110 NDI1YML120C 1542 nt11.04□□□□□ -0.64
VPS35P34110 YCL074WYCL074W 927 nt11.03□□□□□ -0.64
VPS35P34110 RBG1YAL036C 1110 nt11.03□□□□□ -0.64
VPS35P34110 GLR1YPL091W 1452 nt11.02□□□□□ -0.65
VPS35P34110 AIM45YPR004C 1035 nt11.02□□□□□ -0.65
VPS35P34110 AQY2YLL052C 450 nt11□□□□□ -0.65
VPS35P34110 ALG12YNR030W 1656 nt10.99□□□□□ -0.65
VPS35P34110 STR3YGL184C 1398 nt10.99□□□□□ -0.65
VPS35P34110 NBP35YGL091C 987 nt10.98□□□□□ -0.65
VPS35P34110 TIR3YIL011W 810 nt10.97□□□□□ -0.65
VPS35P34110 YHL019W-AYHL019W-A 594 nt10.96□□□□□ -0.65
VPS35P34110 YMR244WYMR244W 1068 nt10.96□□□□□ -0.65
VPS35P34110 PRP4YPR178W 1398 nt10.94□□□□□ -0.66
VPS35P34110 SFA1YDL168W 1161 nt10.94□□□□□ -0.66
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms