Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 YFL067WYFL067W 528 nt12.5□□□□□ -0.41
HCA4P20448 YPR064WYPR064W 420 nt12.49□□□□□ -0.41
HCA4P20448 SPC25YER018C 666 nt12.47□□□□□ -0.41
HCA4P20448 MIC10YCL057C-A 294 nt12.47□□□□□ -0.41
HCA4P20448 TAD3YLR316C 969 nt12.46□□□□□ -0.41
HCA4P20448 DDR2YOL052C-A 186 nt12.46□□□□□ -0.41
HCA4P20448 SNG1YGR197C 1644 nt12.46□□□□□ -0.41
HCA4P20448 STB1YNL309W 1263 nt12.45□□□□□ -0.42
HCA4P20448 UBX6YJL048C 1191 nt12.44□□□□□ -0.42
HCA4P20448 ANP1YEL036C 1503 nt12.43□□□□□ -0.42
HCA4P20448 YDL086C-AYDL086C-A 435 nt12.43□□□□□ -0.42
HCA4P20448 HEM12YDR047W 1089 nt12.43□□□□□ -0.42
HCA4P20448 YDR524C-BYDR524C-B 201 nt12.41□□□□□ -0.42
HCA4P20448 tL(GAG)GtL(GAG)G 82 nt12.41□□□□□ -0.42
HCA4P20448 YFL054CYFL054C 1941 nt12.41□□□□□ -0.42
HCA4P20448 CCT4YDL143W 1587 nt12.38□□□□□ -0.43
HCA4P20448 GPI16YHR188C 1833 nt12.35□□□□□ -0.43
HCA4P20448 YHR056W-AYHR056W-A 435 nt12.35□□□□□ -0.43
HCA4P20448 FEN2YCR028C 1539 nt12.34□□□□□ -0.43
HCA4P20448 VPS60YDR486C 690 nt12.34□□□□□ -0.43
HCA4P20448 SPT8YLR055C 1809 nt12.33□□□□□ -0.44
HCA4P20448 BDH1YAL060W 1149 nt12.33□□□□□ -0.44
HCA4P20448 ALG3YBL082C 1377 nt12.31□□□□□ -0.44
HCA4P20448 YDR094WYDR094W 336 nt12.3□□□□□ -0.44
HCA4P20448 YSP3YOR003W 1437 nt12.26□□□□□ -0.45
HCA4P20448 YJL225CYJL225C 5277 nt12.24□□□□□ -0.45
HCA4P20448 YIR016WYIR016W 798 nt12.24□□□□□ -0.45
HCA4P20448 YFR018CYFR018C 1092 nt12.23□□□□□ -0.45
HCA4P20448 SWC5YBR231C 912 nt12.23□□□□□ -0.45
HCA4P20448 RAX1YOR301W 1308 nt12.21□□□□□ -0.45
HCA4P20448 YLR415CYLR415C 339 nt12.2□□□□□ -0.46
HCA4P20448 MIC12YBR262C 321 nt12.2□□□□□ -0.46
HCA4P20448 SWE1YJL187C 2460 nt12.19□□□□□ -0.46
HCA4P20448 PRE6YOL038W 765 nt12.15□□□□□ -0.46
HCA4P20448 PEX25YPL112C 1185 nt12.15□□□□□ -0.46
HCA4P20448 YFL066CYFL066C 1179 nt12.14□□□□□ -0.47
HCA4P20448 YNL115CYNL115C 1935 nt12.12□□□□□ -0.47
HCA4P20448 BNA2YJR078W 1362 nt12.1□□□□□ -0.47
HCA4P20448 CCA1YER168C 1641 nt12.08□□□□□ -0.48
HCA4P20448 PAU16YKL224C 372 nt12.03□□□□□ -0.48
HCA4P20448 AGP1YCL025C 1902 nt12.02□□□□□ -0.49
HCA4P20448 XDJ1YLR090W 1380 nt12.02□□□□□ -0.49
HCA4P20448 YFL015W-AYFL015W-A 318 nt12.01□□□□□ -0.49
HCA4P20448 YGR201CYGR201C 678 nt11.99□□□□□ -0.49
HCA4P20448 HHO1YPL127C 777 nt11.99□□□□□ -0.49
HCA4P20448 SHM2YLR058C 1410 nt11.98□□□□□ -0.49
HCA4P20448 RRT5YFR032C 870 nt11.98□□□□□ -0.49
HCA4P20448 VPS75YNL246W 795 nt11.97□□□□□ -0.49
HCA4P20448 TIM17YJL143W 477 nt11.93□□□□□ -0.5
HCA4P20448 GDH3YAL062W 1374 nt11.92□□□□□ -0.5
HCA4P20448 NIT1YIL164C 600 nt11.92□□□□□ -0.5
HCA4P20448 RDN37-1RDN37-1 5354 nt11.92□□□□□ -0.5
HCA4P20448 RDN37-2RDN37-2 5354 nt11.92□□□□□ -0.5
HCA4P20448 DUT1YBR252W 444 nt11.89□□□□□ -0.51
HCA4P20448 AVT6YER119C 1347 nt11.84□□□□□ -0.51
HCA4P20448 MIR1YJR077C 936 nt11.83□□□□□ -0.52
HCA4P20448 SGT2YOR007C 1041 nt11.83□□□□□ -0.52
HCA4P20448 DAT1YML113W 747 nt11.79□□□□□ -0.52
HCA4P20448 FUR4YBR021W 1902 nt11.78□□□□□ -0.52
HCA4P20448 GOR1YNL274C 1053 nt11.77□□□□□ -0.53
HCA4P20448 RDN18-1RDN18-1 1800 nt11.72□□□□□ -0.53
HCA4P20448 RDN18-2RDN18-2 1800 nt11.72□□□□□ -0.53
HCA4P20448 STR3YGL184C 1398 nt11.71□□□□□ -0.53
HCA4P20448 YDR010CYDR010C 333 nt11.71□□□□□ -0.53
HCA4P20448 UME6YDR207C 2511 nt11.7□□□□□ -0.54
HCA4P20448 YCL074WYCL074W 927 nt11.7□□□□□ -0.54
HCA4P20448 DUS1YML080W 1272 nt11.7□□□□□ -0.54
HCA4P20448 THI74YDR438W 1113 nt11.69□□□□□ -0.54
HCA4P20448 SHB17YKR043C 816 nt11.69□□□□□ -0.54
HCA4P20448 GLK1YCL040W 1503 nt11.69□□□□□ -0.54
HCA4P20448 PAU7YAR020C 168 nt11.68□□□□□ -0.54
HCA4P20448 NAT4YMR069W 858 nt11.68□□□□□ -0.54
HCA4P20448 MSF1YPR047W 1410 nt11.67□□□□□ -0.54
HCA4P20448 HSP60YLR259C 1719 nt11.66□□□□□ -0.54
HCA4P20448 YCR102CYCR102C 1107 nt11.65□□□□□ -0.54
HCA4P20448 SBA1YKL117W 651 nt11.65□□□□□ -0.54
HCA4P20448 UBA4YHR111W 1323 nt11.64□□□□□ -0.55
HCA4P20448 NBP35YGL091C 987 nt11.63□□□□□ -0.55
HCA4P20448 RET2YFR051C 1641 nt11.59□□□□□ -0.55
HCA4P20448 AQY2YLL052C 450 nt11.57□□□□□ -0.56
HCA4P20448 BOR1YNL275W 1731 nt11.53□□□□□ -0.56
HCA4P20448 SFA1YDL168W 1161 nt11.53□□□□□ -0.56
HCA4P20448 SHH4YLR164W 507 nt11.53□□□□□ -0.56
HCA4P20448 YSR3YKR053C 1215 nt11.52□□□□□ -0.57
HCA4P20448 YKR005CYKR005C 1578 nt11.52□□□□□ -0.57
HCA4P20448 YGL034CYGL034C 366 nt11.51□□□□□ -0.57
HCA4P20448 PRP4YPR178W 1398 nt11.5□□□□□ -0.57
HCA4P20448 PHO89YBR296C 1725 nt11.49□□□□□ -0.57
HCA4P20448 TIR3YIL011W 810 nt11.49□□□□□ -0.57
HCA4P20448 XYL2YLR070C 1071 nt11.47□□□□□ -0.57
HCA4P20448 ARP6YLR085C 1317 nt11.46□□□□□ -0.57
HCA4P20448 RTN2YDL204W 1182 nt11.45□□□□□ -0.58
HCA4P20448 DPS1YLL018C 1674 nt11.44□□□□□ -0.58
HCA4P20448 YGR259CYGR259C 441 nt11.44□□□□□ -0.58
HCA4P20448 COQ2YNR041C 1119 nt11.43□□□□□ -0.58
HCA4P20448 YHL019W-AYHL019W-A 594 nt11.42□□□□□ -0.58
HCA4P20448 POM34YLR018C 900 nt11.42□□□□□ -0.58
HCA4P20448 YCR087WYCR087W 516 nt11.4□□□□□ -0.58
HCA4P20448 LSC2YGR244C 1284 nt11.4□□□□□ -0.58
HCA4P20448 PLB1YMR008C 1995 nt11.37□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms