Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.58■□□□□ 0.73
CDH20Q9HBT6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH20Q9HBT6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDH20Q9HBT6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH20Q9HBT6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH20Q9HBT6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDH20Q9HBT6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH20Q9HBT6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH20Q9HBT6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH20Q9HBT6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.58■□□□□ 0.72
CDH20Q9HBT6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.58■□□□□ 0.72
CDH20Q9HBT6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH20Q9HBT6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH20Q9HBT6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH20Q9HBT6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH20Q9HBT6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH20Q9HBT6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH20Q9HBT6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.56■□□□□ 0.72
CDH20Q9HBT6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.56■□□□□ 0.72
CDH20Q9HBT6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.56■□□□□ 0.72
CDH20Q9HBT6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH20Q9HBT6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.56■□□□□ 0.72
CDH20Q9HBT6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH20Q9HBT6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH20Q9HBT6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH20Q9HBT6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH20Q9HBT6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH20Q9HBT6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH20Q9HBT6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH20Q9HBT6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH20Q9HBT6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH20Q9HBT6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH20Q9HBT6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH20Q9HBT6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDH20Q9HBT6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH20Q9HBT6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CDH20Q9HBT6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH20Q9HBT6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH20Q9HBT6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH20Q9HBT6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH20Q9HBT6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH20Q9HBT6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH20Q9HBT6 AC009102.2-201ENST00000606772 1639 ntBASIC19.54■□□□□ 0.72
CDH20Q9HBT6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH20Q9HBT6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH20Q9HBT6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH20Q9HBT6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH20Q9HBT6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CDH20Q9HBT6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH20Q9HBT6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CDH20Q9HBT6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH20Q9HBT6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH20Q9HBT6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH20Q9HBT6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.53■□□□□ 0.72
CDH20Q9HBT6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH20Q9HBT6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH20Q9HBT6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CDH20Q9HBT6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.52■□□□□ 0.72
CDH20Q9HBT6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH20Q9HBT6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH20Q9HBT6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH20Q9HBT6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDH20Q9HBT6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.52■□□□□ 0.72
CDH20Q9HBT6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms