Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-2Q9C056 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.15■□□□□ 0.5
NKX6-2Q9C056 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NKX6-2Q9C056 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
NKX6-2Q9C056 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-2Q9C056 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-2Q9C056 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.15■□□□□ 0.5
NKX6-2Q9C056 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-2Q9C056 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-2Q9C056 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.14■□□□□ 0.5
NKX6-2Q9C056 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.14■□□□□ 0.5
NKX6-2Q9C056 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.14■□□□□ 0.49
NKX6-2Q9C056 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NKX6-2Q9C056 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-2Q9C056 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NKX6-2Q9C056 AL359504.2-201ENST00000605506 1601 ntBASIC18.14■□□□□ 0.49
NKX6-2Q9C056 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NKX6-2Q9C056 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NKX6-2Q9C056 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-2Q9C056 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-2Q9C056 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-2Q9C056 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NKX6-2Q9C056 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NKX6-2Q9C056 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-2Q9C056 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-2Q9C056 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-2Q9C056 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-2Q9C056 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-2Q9C056 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-2Q9C056 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NKX6-2Q9C056 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-2Q9C056 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-2Q9C056 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-2Q9C056 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-2Q9C056 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-2Q9C056 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NKX6-2Q9C056 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-2Q9C056 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-2Q9C056 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-2Q9C056 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-2Q9C056 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-2Q9C056 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-2Q9C056 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-2Q9C056 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX6-2Q9C056 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-2Q9C056 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.12■□□□□ 0.49
NKX6-2Q9C056 AC026310.3-201ENST00000625186 2373 ntBASIC18.12■□□□□ 0.49
NKX6-2Q9C056 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-2Q9C056 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-2Q9C056 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NKX6-2Q9C056 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
NKX6-2Q9C056 AC044849.2-201ENST00000606596 710 ntBASIC18.11■□□□□ 0.49
NKX6-2Q9C056 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-2Q9C056 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-2Q9C056 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NKX6-2Q9C056 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NKX6-2Q9C056 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
NKX6-2Q9C056 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX6-2Q9C056 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-2Q9C056 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-2Q9C056 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-2Q9C056 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-2Q9C056 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-2Q9C056 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-2Q9C056 ANOS2P-203ENST00000472227 1816 ntBASIC18.1■□□□□ 0.49
NKX6-2Q9C056 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX6-2Q9C056 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-2Q9C056 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.1■□□□□ 0.49
NKX6-2Q9C056 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.1■□□□□ 0.49
NKX6-2Q9C056 AC148477.6-201ENST00000623746 465 ntBASIC18.1■□□□□ 0.49
NKX6-2Q9C056 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-2Q9C056 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-2Q9C056 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NKX6-2Q9C056 AL359258.2-201ENST00000564063 1566 ntBASIC18.09■□□□□ 0.49
NKX6-2Q9C056 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NKX6-2Q9C056 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-2Q9C056 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-2Q9C056 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NKX6-2Q9C056 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.09■□□□□ 0.49
NKX6-2Q9C056 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.09■□□□□ 0.49
NKX6-2Q9C056 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-2Q9C056 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-2Q9C056 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-2Q9C056 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NKX6-2Q9C056 MIR219A2-201ENST00000608502 1504 ntBASIC18.08■□□□□ 0.49
NKX6-2Q9C056 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
NKX6-2Q9C056 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NKX6-2Q9C056 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
NKX6-2Q9C056 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
NKX6-2Q9C056 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.08■□□□□ 0.49
NKX6-2Q9C056 AC087741.3-201ENST00000624270 1347 ntBASIC18.08■□□□□ 0.49
NKX6-2Q9C056 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NKX6-2Q9C056 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NKX6-2Q9C056 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.08■□□□□ 0.48
NKX6-2Q9C056 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.08■□□□□ 0.48
NKX6-2Q9C056 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NKX6-2Q9C056 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.08■□□□□ 0.48
NKX6-2Q9C056 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NKX6-2Q9C056 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
NKX6-2Q9C056 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms