Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SNX18Q96RF0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
SNX18Q96RF0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX18Q96RF0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
SNX18Q96RF0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX18Q96RF0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX18Q96RF0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SNX18Q96RF0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SNX18Q96RF0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SNX18Q96RF0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.36■□□□□ 0.85
SNX18Q96RF0 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX18Q96RF0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.36■□□□□ 0.85
SNX18Q96RF0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.36■□□□□ 0.85
SNX18Q96RF0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX18Q96RF0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX18Q96RF0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SNX18Q96RF0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX18Q96RF0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SNX18Q96RF0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX18Q96RF0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SNX18Q96RF0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.35■□□□□ 0.85
SNX18Q96RF0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX18Q96RF0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.35■□□□□ 0.85
SNX18Q96RF0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.35■□□□□ 0.85
SNX18Q96RF0 KRT18P24-201ENST00000344739 1156 ntBASIC20.35■□□□□ 0.85
SNX18Q96RF0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNX18Q96RF0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX18Q96RF0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.35■□□□□ 0.85
SNX18Q96RF0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SNX18Q96RF0 AC092068.2-201ENST00000590491 1708 ntBASIC20.35■□□□□ 0.85
SNX18Q96RF0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.35■□□□□ 0.85
SNX18Q96RF0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.35■□□□□ 0.85
SNX18Q96RF0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.35■□□□□ 0.85
SNX18Q96RF0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX18Q96RF0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX18Q96RF0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.34■□□□□ 0.85
SNX18Q96RF0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNX18Q96RF0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SNX18Q96RF0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX18Q96RF0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX18Q96RF0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX18Q96RF0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SNX18Q96RF0 AC120024.1-201ENST00000562672 995 ntBASIC20.34■□□□□ 0.85
SNX18Q96RF0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX18Q96RF0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX18Q96RF0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX18Q96RF0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX18Q96RF0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX18Q96RF0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX18Q96RF0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SNX18Q96RF0 ALDH1A3-203ENST00000557963 1670 ntBASIC20.33■□□□□ 0.85
SNX18Q96RF0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNX18Q96RF0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.33■□□□□ 0.85
SNX18Q96RF0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.33■□□□□ 0.85
SNX18Q96RF0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.33■□□□□ 0.85
SNX18Q96RF0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNX18Q96RF0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SNX18Q96RF0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNX18Q96RF0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNX18Q96RF0 ANOS2P-203ENST00000472227 1816 ntBASIC20.32■□□□□ 0.84
SNX18Q96RF0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SNX18Q96RF0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.32■□□□□ 0.84
SNX18Q96RF0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
SNX18Q96RF0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNX18Q96RF0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SNX18Q96RF0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.32■□□□□ 0.84
SNX18Q96RF0 PVT1_1.1-201ENST00000615125 194 ntBASIC20.32■□□□□ 0.84
SNX18Q96RF0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX18Q96RF0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX18Q96RF0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX18Q96RF0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX18Q96RF0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SNX18Q96RF0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX18Q96RF0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNX18Q96RF0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX18Q96RF0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX18Q96RF0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SNX18Q96RF0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.31■□□□□ 0.84
SNX18Q96RF0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SNX18Q96RF0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SNX18Q96RF0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SNX18Q96RF0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX18Q96RF0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX18Q96RF0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX18Q96RF0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX18Q96RF0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX18Q96RF0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX18Q96RF0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX18Q96RF0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX18Q96RF0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX18Q96RF0 AC103834.1-201ENST00000520383 144 ntBASIC20.3■□□□□ 0.84
SNX18Q96RF0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX18Q96RF0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.3■□□□□ 0.84
SNX18Q96RF0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX18Q96RF0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX18Q96RF0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.3■□□□□ 0.84
SNX18Q96RF0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX18Q96RF0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX18Q96RF0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX18Q96RF0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms