Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 JTB-203ENST00000368589 1216 ntTSL 2 BASIC28.26■■■□□ 2.11
SH3TC1Q8TE82 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SH3TC1Q8TE82 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
SH3TC1Q8TE82 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SH3TC1Q8TE82 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
SH3TC1Q8TE82 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
SH3TC1Q8TE82 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SH3TC1Q8TE82 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SH3TC1Q8TE82 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28.25■■■□□ 2.11
SH3TC1Q8TE82 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28.25■■■□□ 2.11
SH3TC1Q8TE82 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.25■■■□□ 2.11
SH3TC1Q8TE82 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC28.25■■■□□ 2.11
SH3TC1Q8TE82 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SH3TC1Q8TE82 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC28.24■■■□□ 2.11
SH3TC1Q8TE82 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
SH3TC1Q8TE82 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC28.24■■■□□ 2.11
SH3TC1Q8TE82 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.24■■■□□ 2.11
SH3TC1Q8TE82 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SH3TC1Q8TE82 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SH3TC1Q8TE82 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.24■■■□□ 2.11
SH3TC1Q8TE82 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SH3TC1Q8TE82 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
SH3TC1Q8TE82 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC28.22■■■□□ 2.11
SH3TC1Q8TE82 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
SH3TC1Q8TE82 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SH3TC1Q8TE82 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SH3TC1Q8TE82 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SH3TC1Q8TE82 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.21■■■□□ 2.11
SH3TC1Q8TE82 SLC47A1P1-202ENST00000449666 945 ntBASIC28.21■■■□□ 2.11
SH3TC1Q8TE82 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC28.21■■■□□ 2.11
SH3TC1Q8TE82 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.21■■■□□ 2.11
SH3TC1Q8TE82 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
SH3TC1Q8TE82 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.21■■■□□ 2.11
SH3TC1Q8TE82 AC126544.1-201ENST00000580842 1059 ntBASIC28.2■■■□□ 2.11
SH3TC1Q8TE82 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SH3TC1Q8TE82 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
SH3TC1Q8TE82 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SH3TC1Q8TE82 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
SH3TC1Q8TE82 AL162430.1-201ENST00000480705 870 ntBASIC28.19■■■□□ 2.1
SH3TC1Q8TE82 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC28.19■■■□□ 2.1
SH3TC1Q8TE82 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SH3TC1Q8TE82 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
SH3TC1Q8TE82 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SH3TC1Q8TE82 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
SH3TC1Q8TE82 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SH3TC1Q8TE82 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
SH3TC1Q8TE82 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC28.18■■■□□ 2.1
SH3TC1Q8TE82 PARL-206ENST00000435888 1098 ntTSL 5 BASIC28.18■■■□□ 2.1
SH3TC1Q8TE82 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SH3TC1Q8TE82 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
SH3TC1Q8TE82 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SH3TC1Q8TE82 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SH3TC1Q8TE82 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
SH3TC1Q8TE82 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
SH3TC1Q8TE82 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC28.18■■■□□ 2.1
SH3TC1Q8TE82 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
SH3TC1Q8TE82 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SH3TC1Q8TE82 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SH3TC1Q8TE82 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.17■■■□□ 2.1
SH3TC1Q8TE82 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SH3TC1Q8TE82 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.16■■■□□ 2.1
SH3TC1Q8TE82 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SH3TC1Q8TE82 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
SH3TC1Q8TE82 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SH3TC1Q8TE82 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
SH3TC1Q8TE82 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC28.16■■■□□ 2.1
SH3TC1Q8TE82 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
SH3TC1Q8TE82 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SH3TC1Q8TE82 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SH3TC1Q8TE82 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SH3TC1Q8TE82 AK1-201ENST00000223836 736 ntTSL 3 BASIC28.15■■■□□ 2.1
SH3TC1Q8TE82 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC28.15■■■□□ 2.1
SH3TC1Q8TE82 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC28.15■■■□□ 2.1
SH3TC1Q8TE82 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SH3TC1Q8TE82 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.14■■■□□ 2.1
SH3TC1Q8TE82 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SH3TC1Q8TE82 TSPY26P-201ENST00000476365 1326 ntBASIC28.14■■■□□ 2.1
SH3TC1Q8TE82 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SH3TC1Q8TE82 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.14■■■□□ 2.1
SH3TC1Q8TE82 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SH3TC1Q8TE82 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SH3TC1Q8TE82 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SH3TC1Q8TE82 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC28.14■■■□□ 2.09
SH3TC1Q8TE82 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SH3TC1Q8TE82 AL499627.2-201ENST00000606283 725 ntBASIC28.14■■■□□ 2.09
SH3TC1Q8TE82 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
SH3TC1Q8TE82 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.09
SH3TC1Q8TE82 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SH3TC1Q8TE82 AC133637.1-201ENST00000624115 1537 ntBASIC28.13■■■□□ 2.09
SH3TC1Q8TE82 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SH3TC1Q8TE82 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
SH3TC1Q8TE82 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SH3TC1Q8TE82 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SH3TC1Q8TE82 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SH3TC1Q8TE82 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SH3TC1Q8TE82 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC28.12■■■□□ 2.09
SH3TC1Q8TE82 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SH3TC1Q8TE82 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
SH3TC1Q8TE82 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SH3TC1Q8TE82 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms