Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFX6Q8HWS3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 RARRES2P1-201ENST00000474487 481 ntBASIC23.35■■□□□ 1.33
RFX6Q8HWS3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 AC021242.3-201ENST00000607598 1377 ntBASIC23.35■■□□□ 1.33
RFX6Q8HWS3 AC079630.1-202ENST00000618127 1840 ntBASIC23.35■■□□□ 1.33
RFX6Q8HWS3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.35■■□□□ 1.33
RFX6Q8HWS3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFX6Q8HWS3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFX6Q8HWS3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.34■■□□□ 1.33
RFX6Q8HWS3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
RFX6Q8HWS3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RFX6Q8HWS3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFX6Q8HWS3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.34■■□□□ 1.33
RFX6Q8HWS3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.34■■□□□ 1.33
RFX6Q8HWS3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RFX6Q8HWS3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
RFX6Q8HWS3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RFX6Q8HWS3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.33■■□□□ 1.33
RFX6Q8HWS3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RFX6Q8HWS3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RFX6Q8HWS3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
RFX6Q8HWS3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
RFX6Q8HWS3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RFX6Q8HWS3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
RFX6Q8HWS3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RFX6Q8HWS3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFX6Q8HWS3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.32■■□□□ 1.32
RFX6Q8HWS3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFX6Q8HWS3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFX6Q8HWS3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RFX6Q8HWS3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.32■■□□□ 1.32
RFX6Q8HWS3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RFX6Q8HWS3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RFX6Q8HWS3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.32■■□□□ 1.32
RFX6Q8HWS3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFX6Q8HWS3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.31■■□□□ 1.32
RFX6Q8HWS3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFX6Q8HWS3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFX6Q8HWS3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.31■■□□□ 1.32
RFX6Q8HWS3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.31■■□□□ 1.32
RFX6Q8HWS3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
RFX6Q8HWS3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFX6Q8HWS3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RFX6Q8HWS3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RFX6Q8HWS3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.31■■□□□ 1.32
RFX6Q8HWS3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
RFX6Q8HWS3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RFX6Q8HWS3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFX6Q8HWS3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
RFX6Q8HWS3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.3■■□□□ 1.32
RFX6Q8HWS3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX6Q8HWS3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX6Q8HWS3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
RFX6Q8HWS3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX6Q8HWS3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RFX6Q8HWS3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX6Q8HWS3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX6Q8HWS3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX6Q8HWS3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFX6Q8HWS3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.29■■□□□ 1.32
RFX6Q8HWS3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.29■■□□□ 1.32
RFX6Q8HWS3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.29■■□□□ 1.32
RFX6Q8HWS3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.29■■□□□ 1.32
RFX6Q8HWS3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFX6Q8HWS3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.29■■□□□ 1.32
RFX6Q8HWS3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.29■■□□□ 1.32
RFX6Q8HWS3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.29■■□□□ 1.32
RFX6Q8HWS3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFX6Q8HWS3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
RFX6Q8HWS3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
RFX6Q8HWS3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.28■■□□□ 1.32
RFX6Q8HWS3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFX6Q8HWS3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFX6Q8HWS3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.28■■□□□ 1.32
RFX6Q8HWS3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFX6Q8HWS3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RFX6Q8HWS3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFX6Q8HWS3 KRT125P-201ENST00000546827 989 ntBASIC23.28■■□□□ 1.32
RFX6Q8HWS3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RFX6Q8HWS3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RFX6Q8HWS3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.28■■□□□ 1.32
RFX6Q8HWS3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFX6Q8HWS3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFX6Q8HWS3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFX6Q8HWS3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RFX6Q8HWS3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFX6Q8HWS3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms