Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.342e-12■■■■□ 20.9
CSTF2P33240 CLHC1-208ENST00000451916 616 ntTSL 35.19□□□□□ -1.582e-12■■■■□ 20.9
CSTF2P33240 CLHC1-209ENST00000463300 572 ntTSL 45.18□□□□□ -1.582e-12■■■■□ 20.9
CSTF2P33240 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.73□□□□□ -1.652e-12■■■■□ 20.9
CSTF2P33240 CLHC1-212ENST00000487320 594 ntTSL 44.18□□□□□ -1.742e-12■■■■□ 20.9
CSTF2P33240 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.752e-12■■■■□ 20.9
CSTF2P33240 CLHC1-210ENST00000464243 509 ntTSL 43.33□□□□□ -1.882e-12■■■■□ 20.9
CSTF2P33240 CLHC1-213ENST00000494539 596 ntTSL 42.77□□□□□ -1.972e-12■■■■□ 20.9
CSTF2P33240 CLHC1-211ENST00000466020 153 ntTSL 51.05□□□□□ -2.242e-12■■■■□ 20.9
CSTF2P33240 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.42e-6■■■■□ 20.9
CSTF2P33240 AGPAT3-213ENST00000479117 1510 ntTSL 516.46■□□□□ 0.232e-6■■■■□ 20.9
CSTF2P33240 AGPAT3-210ENST00000457068 924 ntTSL 315.64■□□□□ 0.092e-6■■■■□ 20.9
CSTF2P33240 AGPAT3-206ENST00000422850 1003 ntTSL 515.64■□□□□ 0.092e-6■■■■□ 20.9
CSTF2P33240 AGPAT3-214ENST00000481319 616 ntTSL 314.33□□□□□ -0.122e-6■■■■□ 20.9
CSTF2P33240 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.172e-6■■■■□ 20.9
CSTF2P33240 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.22e-6■■■■□ 20.9
CSTF2P33240 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.382e-6■■■■□ 20.9
CSTF2P33240 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.382e-6■■■■□ 20.9
CSTF2P33240 AGPAT3-207ENST00000445582 582 ntTSL 312.15□□□□□ -0.462e-6■■■■□ 20.9
CSTF2P33240 AGPAT3-208ENST00000448287 454 ntTSL 311.59□□□□□ -0.552e-6■■■■□ 20.9
CSTF2P33240 AGPAT3-203ENST00000398058 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.572e-6■■■■□ 20.9
CSTF2P33240 SFXN5-208ENST00000463277 575 ntTSL 410.06□□□□□ -0.83e-7■■■■□ 20.9
CSTF2P33240 SFXN5-209ENST00000464825 532 ntTSL 48.08□□□□□ -1.123e-7■■■■□ 20.9
CSTF2P33240 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.375e-7■■■■□ 20.9
CSTF2P33240 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.45e-7■■■■□ 20.9
CSTF2P33240 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC11.81□□□□□ -0.525e-7■■■■□ 20.9
CSTF2P33240 PTPRK-221ENST00000532331 5757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.625e-7■■■■□ 20.9
CSTF2P33240 PTPRK-216ENST00000524481 3157 ntTSL 210.84□□□□□ -0.675e-7■■■■□ 20.9
CSTF2P33240 PTPRK-205ENST00000368213 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.695e-7■■■■□ 20.9
CSTF2P33240 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.115e-7■■■■□ 20.9
CSTF2P33240 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.08□□□□□ -0.161e-6■■■■□ 20.9
CSTF2P33240 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.81□□□□□ -0.21e-6■■■■□ 20.9
CSTF2P33240 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.23□□□□□ -1.251e-6■■■■□ 20.9
CSTF2P33240 TTC21B-202ENST00000392695 1572 ntTSL 55.95□□□□□ -1.464e-14■■■■□ 20.8
CSTF2P33240 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.494e-14■■■■□ 20.8
CSTF2P33240 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.81□□□□□ -1.167e-7■■■■□ 20.8
CSTF2P33240 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.156e-7■■■■□ 20.8
CSTF2P33240 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.236e-7■■■■□ 20.8
CSTF2P33240 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.99□□□□□ -0.176e-7■■■■□ 20.8
CSTF2P33240 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.65□□□□□ -0.226e-7■■■■□ 20.8
CSTF2P33240 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.896e-7■■■■□ 20.8
CSTF2P33240 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.166e-7■■■■□ 20.8
CSTF2P33240 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.93e-7■■■■□ 20.8
CSTF2P33240 FOXK2-202ENST00000473637 3462 ntTSL 1 (best)18.07■□□□□ 0.483e-7■■■■□ 20.8
CSTF2P33240 FOXK2-206ENST00000531030 805 ntTSL 317.93■□□□□ 0.463e-7■■■■□ 20.8
CSTF2P33240 FOXK2-203ENST00000526383 786 ntTSL 513.69□□□□□ -0.223e-7■■■■□ 20.8
CSTF2P33240 SNRK-206ENST00000468628 470 ntTSL 37.91□□□□□ -1.146e-8■■■■□ 20.7
CSTF2P33240 C1GALT1-203ENST00000419721 591 ntTSL 320.31■□□□□ 0.842e-6■■■■□ 20.7
CSTF2P33240 C1GALT1-207ENST00000476068 1186 ntTSL 1 (best)12.82□□□□□ -0.362e-6■■■■□ 20.7
CSTF2P33240 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.462e-6■■■■□ 20.7
CSTF2P33240 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.812e-7■■■■□ 20.7
CSTF2P33240 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.092e-7■■■■□ 20.7
CSTF2P33240 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)13.71□□□□□ -0.212e-7■■■■□ 20.7
CSTF2P33240 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.372e-7■■■■□ 20.7
CSTF2P33240 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.77□□□□□ -0.372e-7■■■■□ 20.7
CSTF2P33240 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.482e-7■■■■□ 20.7
CSTF2P33240 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC11.24□□□□□ -0.612e-7■■■■□ 20.7
CSTF2P33240 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.72e-7■■■■□ 20.7
CSTF2P33240 AC040162.3-201ENST00000572067 3907 ntBASIC9.81□□□□□ -0.842e-7■■■■□ 20.7
CSTF2P33240 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.142e-7■■■■□ 20.7
CSTF2P33240 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.352e-7■■■■□ 20.7
CSTF2P33240 PRRC2C-211ENST00000495585 5566 ntTSL 1 (best)4.85□□□□□ -1.632e-7■■■■□ 20.7
CSTF2P33240 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.64□□□□□ -1.832e-7■■■■□ 20.7
CSTF2P33240 RUNX1-214ENST00000475045 1582 ntTSL 511.38□□□□□ -0.591e-6■■■■□ 20.7
CSTF2P33240 PKP4-205ENST00000426248 4134 ntTSL 1 (best)15.19■□□□□ 0.028e-7■■■■□ 20.7
CSTF2P33240 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.798e-7■■■■□ 20.7
CSTF2P33240 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.058e-7■■■■□ 20.7
CSTF2P33240 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.04□□□□□ -1.288e-7■■■■□ 20.7
CSTF2P33240 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.242e-6■■■■□ 20.7
CSTF2P33240 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.012e-6■■■■□ 20.7
CSTF2P33240 BRD2-212ENST00000482914 4834 ntTSL 1 (best)13.61□□□□□ -0.232e-6■■■■□ 20.7
CSTF2P33240 BRD2-204ENST00000449025 3210 ntAPPRIS ALT2 TSL 1 (best)11.71□□□□□ -0.532e-6■■■■□ 20.7
CSTF2P33240 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.532e-6■■■■□ 20.7
CSTF2P33240 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.922e-6■■■■□ 20.7
CSTF2P33240 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.29■□□□□ 0.365e-7■■■■□ 20.7
CSTF2P33240 DANCR-205ENST00000623036 748 ntTSL 5 BASIC10.23□□□□□ -0.775e-7■■■■□ 20.7
CSTF2P33240 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.66■■□□□ 1.225e-7■■■■□ 20.7
CSTF2P33240 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.18■■□□□ 1.145e-7■■■■□ 20.7
CSTF2P33240 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.845e-7■■■■□ 20.7
CSTF2P33240 SUMF1-204ENST00000448413 3150 ntTSL 213.99□□□□□ -0.175e-7■■■■□ 20.7
CSTF2P33240 SUMF1-203ENST00000405420 1128 ntTSL 1 (best) BASIC11.89□□□□□ -0.515e-7■■■■□ 20.7
CSTF2P33240 LRRC59-202ENST00000503118 438 ntTSL 57.12□□□□□ -1.275e-7■■■■□ 20.7
CSTF2P33240 ANKRD11-211ENST00000566973 442 ntTSL 220.37■□□□□ 0.851e-6■■■■□ 20.6
CSTF2P33240 ANKRD11-215ENST00000568512 294 ntTSL 28.46□□□□□ -1.061e-6■■■■□ 20.6
CSTF2P33240 NUBPL-207ENST00000550355 596 ntTSL 418.42■□□□□ 0.547e-7■■■■□ 20.6
CSTF2P33240 NUBPL-208ENST00000550649 557 ntTSL 518.42■□□□□ 0.547e-7■■■■□ 20.6
CSTF2P33240 NUBPL-211ENST00000552489 541 ntTSL 417.15■□□□□ 0.347e-7■■■■□ 20.6
CSTF2P33240 NUBPL-204ENST00000548937 578 ntTSL 316.19■□□□□ 0.187e-7■■■■□ 20.6
CSTF2P33240 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.197e-7■■■■□ 20.6
CSTF2P33240 NUBPL-203ENST00000547839 2001 ntTSL 27.74□□□□□ -1.177e-7■■■■□ 20.6
CSTF2P33240 NUBPL-210ENST00000551314 567 ntTSL 47.66□□□□□ -1.187e-7■■■■□ 20.6
CSTF2P33240 NUBPL-205ENST00000549838 556 ntTSL 51.96□□□□□ -2.17e-7■■■■□ 20.6
CSTF2P33240 PIK3C2A-203ENST00000531428 1593 ntTSL 1 (best)14.72□□□□□ -0.053e-6■■■■□ 20.6
CSTF2P33240 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.713e-8■■■■□ 20.6
CSTF2P33240 FOXP1-203ENST00000327590 5685 ntTSL 27.68□□□□□ -1.181e-6■■■■□ 20.6
CSTF2P33240 MRPS16-205ENST00000479005 2580 ntTSL 214.81□□□□□ -0.043e-6■■■■□ 20.6
CSTF2P33240 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.413e-6■■■■□ 20.6
CSTF2P33240 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.513e-6■■■■□ 20.6
CSTF2P33240 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.473e-7■■■■□ 20.5
CSTF2P33240 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.71■□□□□ 0.273e-7■■■■□ 20.5
Retrieved 100 of 6,735 protein–RNA pairs in 116.5 ms