RNA–Protein interactions for RNA: ENST00000475045.6

RUNX1-214, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-214ENST00000475045 NISCHQ9Y2I1 1504 aa28.76■■■□□ 2.2
RUNX1-214ENST00000475045 ABCC9O60706 1549 aa26.17■■□□□ 1.78
RUNX1-214ENST00000475045 CCDC180Q9P1Z9 1646 aa25.81■■□□□ 1.72
RUNX1-214ENST00000475045 DNAJC5BQ9UF47 199 aa24.74■■□□□ 1.55
RUNX1-214ENST00000475045 RB1CC1Q8TDY2 1594 aa24.71■■□□□ 1.55
RUNX1-214ENST00000475045 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
RUNX1-214ENST00000475045 NACADO15069 1562 aa24.48■■□□□ 1.51
RUNX1-214ENST00000475045 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.5
RUNX1-214ENST00000475045 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
RUNX1-214ENST00000475045 BICRAQ9NZM4 1560 aa24.02■■□□□ 1.44
RUNX1-214ENST00000475045 MYO15BQ96JP2 1530 aa24.01■■□□□ 1.43
RUNX1-214ENST00000475045 ZCCHC6Q5VYS8 1495 aaKnown RBP23.8■■□□□ 1.4
RUNX1-214ENST00000475045 DCAF1Q9Y4B6 1507 aa23.66■■□□□ 1.38
RUNX1-214ENST00000475045 SCRIBQ14160 1630 aa23.65■■□□□ 1.38
RUNX1-214ENST00000475045 SHROOM4Q9ULL8 1493 aa23.58■■□□□ 1.37
RUNX1-214ENST00000475045 CC2D2AQ9P2K1 1620 aa23.56■■□□□ 1.36
RUNX1-214ENST00000475045 CECR2Q9BXF3 1484 aa23.56■■□□□ 1.36
RUNX1-214ENST00000475045 EIF4G1Q04637 1599 aaKnown RBP23.45■■□□□ 1.35
RUNX1-214ENST00000475045 DNAJC5Q9H3Z4 198 aa22.78■■□□□ 1.24
RUNX1-214ENST00000475045 NCAPD3P42695 1498 aa22.62■■□□□ 1.21
RUNX1-214ENST00000475045 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
RUNX1-214ENST00000475045 ATAD2BQ9ULI0 1458 aa22.57■■□□□ 1.2
RUNX1-214ENST00000475045 CUX2O14529 1486 aa22.53■■□□□ 1.2
RUNX1-214ENST00000475045 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
RUNX1-214ENST00000475045 SMARCA2P51531 1590 aa22.45■■□□□ 1.18
RUNX1-214ENST00000475045 NESP48681 1621 aa22.43■■□□□ 1.18
RUNX1-214ENST00000475045 HMGXB3Q12766 1538 aa22.42■■□□□ 1.18
RUNX1-214ENST00000475045 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
RUNX1-214ENST00000475045 BAZ1AQ9NRL2 1556 aaPredicted RBP22.32■■□□□ 1.16
RUNX1-214ENST00000475045 MROH2BQ7Z745 1585 aa22.21■■□□□ 1.15
RUNX1-214ENST00000475045 PEG3Q9GZU2 1588 aa22.2■■□□□ 1.14
RUNX1-214ENST00000475045 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
RUNX1-214ENST00000475045 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
RUNX1-214ENST00000475045 KIF21AQ7Z4S6 1674 aa22.06■■□□□ 1.12
RUNX1-214ENST00000475045 PDS5BQ9NTI5 1447 aa22.04■■□□□ 1.12
RUNX1-214ENST00000475045 CADPSQ9ULU8 1353 aa21.96■■□□□ 1.11
RUNX1-214ENST00000475045 WIZO95785 1651 aa21.92■■□□□ 1.1
RUNX1-214ENST00000475045 MRC2Q9UBG0 1479 aa21.88■■□□□ 1.09
RUNX1-214ENST00000475045 TRIM41Q8WV44 630 aa21.83■■□□□ 1.09
RUNX1-214ENST00000475045 WDR62O43379 1518 aa21.81■■□□□ 1.08
RUNX1-214ENST00000475045 CEP164Q9UPV0 1460 aa21.76■■□□□ 1.07
RUNX1-214ENST00000475045 FANCD2Q9BXW9 1451 aa21.73■■□□□ 1.07
RUNX1-214ENST00000475045 RSF1Q96T23 1441 aaPredicted RBP21.67■■□□□ 1.06
RUNX1-214ENST00000475045 CFTRP13569 1480 aa21.65■■□□□ 1.06
RUNX1-214ENST00000475045 TOP2AP11388 1531 aaKnown RBP21.6■■□□□ 1.05
RUNX1-214ENST00000475045 URB2Q14146 1524 aaKnown RBP21.58■■□□□ 1.04
RUNX1-214ENST00000475045 OSCARQ8IYS5 282 aa21.53■■□□□ 1.04
RUNX1-214ENST00000475045 CCDC88BA6NC98 1476 aa21.4■■□□□ 1.02
RUNX1-214ENST00000475045 ZNF608Q9ULD9 1512 aaPredicted RBP21.37■■□□□ 1.01
RUNX1-214ENST00000475045 PRDM2Q13029 1718 aa21.33■■□□□ 1
RUNX1-214ENST00000475045 IFT140Q96RY7 1462 aa21.31■■□□□ 1
RUNX1-214ENST00000475045 TOPBP1Q92547 1522 aa21.29■■□□□ 1
RUNX1-214ENST00000475045 RIMBP3CA6NJZ7 1639 aa21.25■□□□□ 0.99
RUNX1-214ENST00000475045 RIMBP3BA6NNM3 1639 aa21.25■□□□□ 0.99
RUNX1-214ENST00000475045 RIMBP3Q9UFD9 1639 aa21.25■□□□□ 0.99
RUNX1-214ENST00000475045 EIF4G3O43432 1585 aaKnown RBP21.19■□□□□ 0.98
RUNX1-214ENST00000475045 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
RUNX1-214ENST00000475045 DNMBPQ6XZF7 1577 aa21.17■□□□□ 0.98
RUNX1-214ENST00000475045 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.98
RUNX1-214ENST00000475045 ABCC8Q09428 1581 aa21.15■□□□□ 0.98
RUNX1-214ENST00000475045 FBLN2P98095 1184 aa21.11■□□□□ 0.97
RUNX1-214ENST00000475045 CYB5RLQ6IPT4 315 aa21.1■□□□□ 0.97
RUNX1-214ENST00000475045 TARBP1Q13395 1621 aaKnown RBP21.08■□□□□ 0.97
RUNX1-214ENST00000475045 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
RUNX1-214ENST00000475045 CHD1O14646 1710 aa21.05■□□□□ 0.96
RUNX1-214ENST00000475045 RAD54L2Q9Y4B4 1467 aa21.05■□□□□ 0.96
RUNX1-214ENST00000475045 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
RUNX1-214ENST00000475045 SOGA1O94964 1423 aa20.98■□□□□ 0.95
RUNX1-214ENST00000475045 ARAP1Q96P48 1450 aa20.97■□□□□ 0.95
RUNX1-214ENST00000475045 TRHP20396 242 aaPredicted RBP20.95■□□□□ 0.94
RUNX1-214ENST00000475045 SNAPC4Q5SXM2 1469 aa20.92■□□□□ 0.94
RUNX1-214ENST00000475045 FGD5Q6ZNL6 1462 aa20.92■□□□□ 0.94
RUNX1-214ENST00000475045 CUX1P39880 1505 aa20.87■□□□□ 0.93
RUNX1-214ENST00000475045 CHMP7Q8WUX9 453 aaPredicted RBP20.87■□□□□ 0.93
RUNX1-214ENST00000475045 CLASP1Q7Z460 1538 aa20.8■□□□□ 0.92
RUNX1-214ENST00000475045 GRIN2BQ13224 1484 aa20.8■□□□□ 0.92
RUNX1-214ENST00000475045 MAGI1Q96QZ7 1491 aaPredicted RBP20.78■□□□□ 0.92
RUNX1-214ENST00000475045 WDR97A6NE52 1622 aa20.77■□□□□ 0.92
RUNX1-214ENST00000475045 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
RUNX1-214ENST00000475045 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
RUNX1-214ENST00000475045 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
RUNX1-214ENST00000475045 SUPT5HO00267 1087 aaKnown RBP20.7■□□□□ 0.9
RUNX1-214ENST00000475045 PBRM1Q86U86 1689 aa20.67■□□□□ 0.9
RUNX1-214ENST00000475045 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
RUNX1-214ENST00000475045 ABCA5Q8WWZ7 1642 aa20.61■□□□□ 0.89
RUNX1-214ENST00000475045 ERCC6L2Q5T890 1561 aa20.54■□□□□ 0.88
RUNX1-214ENST00000475045 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
RUNX1-214ENST00000475045 GRIN2AQ12879 1464 aa20.53■□□□□ 0.88
RUNX1-214ENST00000475045 ADAMTS12P58397 1594 aa20.49■□□□□ 0.87
RUNX1-214ENST00000475045 CEP170Q5SW79 1584 aa20.48■□□□□ 0.87
RUNX1-214ENST00000475045 AEBP2Q6ZN18 517 aaPredicted RBP20.45■□□□□ 0.86
RUNX1-214ENST00000475045 NUP160Q12769 1436 aa20.45■□□□□ 0.86
RUNX1-214ENST00000475045 TOP2BQ02880 1626 aa20.43■□□□□ 0.86
RUNX1-214ENST00000475045 FHAD1B1AJZ9 1412 aa20.43■□□□□ 0.86
RUNX1-214ENST00000475045 BIVM-ERCC5R4GMW8 1640 aa20.41■□□□□ 0.86
RUNX1-214ENST00000475045 SHROOM2Q13796 1616 aa20.35■□□□□ 0.85
RUNX1-214ENST00000475045 ERICH3Q5RHP9 1530 aa20.35■□□□□ 0.85
RUNX1-214ENST00000475045 PRG4Q92954 1404 aaPredicted RBP20.32■□□□□ 0.84
RUNX1-214ENST00000475045 JPH4Q96JJ6 628 aa20.28■□□□□ 0.84
RUNX1-214ENST00000475045 RUSC2Q8N2Y8 1516 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms