Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RPS4Y1P22090 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
RPS4Y1P22090 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPS4Y1P22090 AC005703.6-201ENST00000623265 1329 ntBASIC20.7■□□□□ 0.9
RPS4Y1P22090 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RPS4Y1P22090 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPS4Y1P22090 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4Y1P22090 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4Y1P22090 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4Y1P22090 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.69■□□□□ 0.9
RPS4Y1P22090 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.69■□□□□ 0.9
RPS4Y1P22090 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4Y1P22090 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.69■□□□□ 0.9
RPS4Y1P22090 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4Y1P22090 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4Y1P22090 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
RPS4Y1P22090 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4Y1P22090 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RPS4Y1P22090 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4Y1P22090 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.68■□□□□ 0.9
RPS4Y1P22090 KRT125P-201ENST00000546827 989 ntBASIC20.68■□□□□ 0.9
RPS4Y1P22090 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.68■□□□□ 0.9
RPS4Y1P22090 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4Y1P22090 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4Y1P22090 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RPS4Y1P22090 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4Y1P22090 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPS4Y1P22090 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS4Y1P22090 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS4Y1P22090 AC009299.2-201ENST00000482477 511 ntBASIC20.67■□□□□ 0.9
RPS4Y1P22090 AL451085.2-201ENST00000605085 799 ntBASIC20.67■□□□□ 0.9
RPS4Y1P22090 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.67■□□□□ 0.9
RPS4Y1P22090 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS4Y1P22090 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.66■□□□□ 0.9
RPS4Y1P22090 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.66■□□□□ 0.9
RPS4Y1P22090 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RPS4Y1P22090 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RPS4Y1P22090 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.66■□□□□ 0.9
RPS4Y1P22090 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.66■□□□□ 0.9
RPS4Y1P22090 MIR4787-201ENST00000607364 84 ntBASIC20.66■□□□□ 0.9
RPS4Y1P22090 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RPS4Y1P22090 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.66■□□□□ 0.9
RPS4Y1P22090 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPS4Y1P22090 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RPS4Y1P22090 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RPS4Y1P22090 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RPS4Y1P22090 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.65■□□□□ 0.9
RPS4Y1P22090 AC144652.1-201ENST00000609974 1624 ntBASIC20.65■□□□□ 0.9
RPS4Y1P22090 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPS4Y1P22090 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RPS4Y1P22090 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.65■□□□□ 0.9
RPS4Y1P22090 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPS4Y1P22090 AL353803.4-201ENST00000565882 1934 ntBASIC20.65■□□□□ 0.9
RPS4Y1P22090 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPS4Y1P22090 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPS4Y1P22090 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPS4Y1P22090 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.64■□□□□ 0.9
RPS4Y1P22090 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.64■□□□□ 0.89
RPS4Y1P22090 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4Y1P22090 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4Y1P22090 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4Y1P22090 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RPS4Y1P22090 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.64■□□□□ 0.89
RPS4Y1P22090 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4Y1P22090 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4Y1P22090 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4Y1P22090 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.64■□□□□ 0.89
RPS4Y1P22090 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RPS4Y1P22090 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4Y1P22090 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4Y1P22090 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4Y1P22090 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RPS4Y1P22090 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.64■□□□□ 0.89
RPS4Y1P22090 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4Y1P22090 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4Y1P22090 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y1P22090 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y1P22090 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RPS4Y1P22090 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y1P22090 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y1P22090 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y1P22090 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.63■□□□□ 0.89
RPS4Y1P22090 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RPS4Y1P22090 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y1P22090 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y1P22090 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.63■□□□□ 0.89
RPS4Y1P22090 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.63■□□□□ 0.89
RPS4Y1P22090 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPS4Y1P22090 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
RPS4Y1P22090 AC239859.2-201ENST00000444165 318 ntBASIC20.62■□□□□ 0.89
RPS4Y1P22090 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.62■□□□□ 0.89
RPS4Y1P22090 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.62■□□□□ 0.89
RPS4Y1P22090 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.62■□□□□ 0.89
RPS4Y1P22090 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPS4Y1P22090 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.61■□□□□ 0.89
RPS4Y1P22090 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPS4Y1P22090 C1orf229-201ENST00000623686 2258 ntBASIC20.61■□□□□ 0.89
RPS4Y1P22090 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RPS4Y1P22090 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPS4Y1P22090 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms