Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 FP325331.1-202ENST00000623531 1380 ntBASIC24.93■■□□□ 1.58
COL1A2P08123 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL1A2P08123 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.93■■□□□ 1.58
COL1A2P08123 AC099791.1-201ENST00000416440 715 ntBASIC24.93■■□□□ 1.58
COL1A2P08123 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.93■■□□□ 1.58
COL1A2P08123 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL1A2P08123 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
COL1A2P08123 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.92■■□□□ 1.58
COL1A2P08123 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.92■■□□□ 1.58
COL1A2P08123 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
COL1A2P08123 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
COL1A2P08123 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL1A2P08123 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.92■■□□□ 1.58
COL1A2P08123 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.92■■□□□ 1.58
COL1A2P08123 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
COL1A2P08123 AC233992.3-201ENST00000607491 485 ntBASIC24.92■■□□□ 1.58
COL1A2P08123 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
COL1A2P08123 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
COL1A2P08123 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
COL1A2P08123 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL1A2P08123 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL1A2P08123 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL1A2P08123 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL1A2P08123 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.91■■□□□ 1.58
COL1A2P08123 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL1A2P08123 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL1A2P08123 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL1A2P08123 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL1A2P08123 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.9■■□□□ 1.58
COL1A2P08123 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL1A2P08123 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.9■■□□□ 1.58
COL1A2P08123 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.9■■□□□ 1.58
COL1A2P08123 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
COL1A2P08123 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL1A2P08123 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL1A2P08123 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.89■■□□□ 1.57
COL1A2P08123 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.89■■□□□ 1.57
COL1A2P08123 DUX4L4-201ENST00000566884 1269 ntBASIC24.89■■□□□ 1.57
COL1A2P08123 RARRES2P6-201ENST00000567333 442 ntBASIC24.89■■□□□ 1.57
COL1A2P08123 AL499627.2-201ENST00000606283 725 ntBASIC24.89■■□□□ 1.57
COL1A2P08123 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
COL1A2P08123 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.89■■□□□ 1.57
COL1A2P08123 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A2P08123 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.88■■□□□ 1.57
COL1A2P08123 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
COL1A2P08123 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.88■■□□□ 1.57
COL1A2P08123 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.88■■□□□ 1.57
COL1A2P08123 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A2P08123 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.88■■□□□ 1.57
COL1A2P08123 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL1A2P08123 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.87■■□□□ 1.57
COL1A2P08123 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.87■■□□□ 1.57
COL1A2P08123 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL1A2P08123 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL1A2P08123 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
COL1A2P08123 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
COL1A2P08123 LINC01124-201ENST00000409786 2117 ntBASIC24.86■■□□□ 1.57
COL1A2P08123 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
COL1A2P08123 AL139125.2-201ENST00000623134 1869 ntBASIC24.86■■□□□ 1.57
COL1A2P08123 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.86■■□□□ 1.57
COL1A2P08123 AC144652.1-201ENST00000609974 1624 ntBASIC24.86■■□□□ 1.57
COL1A2P08123 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.86■■□□□ 1.57
COL1A2P08123 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
COL1A2P08123 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL1A2P08123 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL1A2P08123 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL1A2P08123 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
COL1A2P08123 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.85■■□□□ 1.57
COL1A2P08123 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL1A2P08123 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.85■■□□□ 1.57
COL1A2P08123 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL1A2P08123 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.84■■□□□ 1.57
COL1A2P08123 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL1A2P08123 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.84■■□□□ 1.57
COL1A2P08123 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL1A2P08123 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.84■■□□□ 1.57
COL1A2P08123 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL1A2P08123 AC026271.2-201ENST00000428091 497 ntBASIC24.83■■□□□ 1.57
COL1A2P08123 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.83■■□□□ 1.57
COL1A2P08123 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL1A2P08123 AC133637.1-201ENST00000624115 1537 ntBASIC24.83■■□□□ 1.57
COL1A2P08123 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL1A2P08123 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.83■■□□□ 1.57
COL1A2P08123 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.83■■□□□ 1.56
COL1A2P08123 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.82■■□□□ 1.56
COL1A2P08123 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL1A2P08123 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
COL1A2P08123 SLC47A1P1-202ENST00000449666 945 ntBASIC24.82■■□□□ 1.56
COL1A2P08123 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL1A2P08123 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
COL1A2P08123 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
COL1A2P08123 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.82■■□□□ 1.56
COL1A2P08123 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.82■■□□□ 1.56
COL1A2P08123 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.81■■□□□ 1.56
COL1A2P08123 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.81■■□□□ 1.56
COL1A2P08123 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
COL1A2P08123 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.81■■□□□ 1.56
COL1A2P08123 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL1A2P08123 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
COL1A2P08123 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms