Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
CAPNS1P04632 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.33■■□□□ 1.16
CAPNS1P04632 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.32■■□□□ 1.16
CAPNS1P04632 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CAPNS1P04632 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CAPNS1P04632 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CAPNS1P04632 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CAPNS1P04632 CA15P2-201ENST00000611168 834 ntBASIC22.32■■□□□ 1.16
CAPNS1P04632 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.32■■□□□ 1.16
CAPNS1P04632 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPNS1P04632 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CAPNS1P04632 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.31■■□□□ 1.16
CAPNS1P04632 SLC6A10P-202ENST00000431994 2058 ntBASIC22.31■■□□□ 1.16
CAPNS1P04632 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CAPNS1P04632 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CAPNS1P04632 RASA4CP-201ENST00000424092 1398 ntBASIC22.31■■□□□ 1.16
CAPNS1P04632 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.31■■□□□ 1.16
CAPNS1P04632 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.31■■□□□ 1.16
CAPNS1P04632 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.31■■□□□ 1.16
CAPNS1P04632 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.31■■□□□ 1.16
CAPNS1P04632 AC022517.1-201ENST00000592429 346 ntBASIC22.31■■□□□ 1.16
CAPNS1P04632 SNX5-217ENST00000606557 1087 ntBASIC22.31■■□□□ 1.16
CAPNS1P04632 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.31■■□□□ 1.16
CAPNS1P04632 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPNS1P04632 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.3■■□□□ 1.16
CAPNS1P04632 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPNS1P04632 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.3■■□□□ 1.16
CAPNS1P04632 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.3■■□□□ 1.16
CAPNS1P04632 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.3■■□□□ 1.16
CAPNS1P04632 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.3■■□□□ 1.16
CAPNS1P04632 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CAPNS1P04632 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CAPNS1P04632 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.29■■□□□ 1.16
CAPNS1P04632 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPNS1P04632 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CAPNS1P04632 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPNS1P04632 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPNS1P04632 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CAPNS1P04632 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.29■■□□□ 1.16
CAPNS1P04632 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPNS1P04632 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.29■■□□□ 1.16
CAPNS1P04632 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.29■■□□□ 1.16
CAPNS1P04632 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.29■■□□□ 1.16
CAPNS1P04632 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CAPNS1P04632 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPNS1P04632 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CAPNS1P04632 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPNS1P04632 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPNS1P04632 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CAPNS1P04632 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPNS1P04632 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPNS1P04632 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CAPNS1P04632 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.28■■□□□ 1.16
CAPNS1P04632 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CAPNS1P04632 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPNS1P04632 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPNS1P04632 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.28■■□□□ 1.16
CAPNS1P04632 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CAPNS1P04632 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPNS1P04632 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPNS1P04632 AC004448.1-201ENST00000458332 883 ntBASIC22.27■■□□□ 1.16
CAPNS1P04632 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.27■■□□□ 1.16
CAPNS1P04632 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CAPNS1P04632 DUX4L19-201ENST00000557448 1267 ntBASIC22.27■■□□□ 1.16
CAPNS1P04632 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.27■■□□□ 1.16
CAPNS1P04632 AC004812.2-201ENST00000611079 2094 ntBASIC22.27■■□□□ 1.16
CAPNS1P04632 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.26■■□□□ 1.15
CAPNS1P04632 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CAPNS1P04632 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CAPNS1P04632 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CAPNS1P04632 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CAPNS1P04632 IRS3P-201ENST00000223076 1006 ntBASIC22.26■■□□□ 1.15
CAPNS1P04632 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CAPNS1P04632 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.26■■□□□ 1.15
CAPNS1P04632 AC092437.1-201ENST00000624794 1048 ntBASIC22.26■■□□□ 1.15
CAPNS1P04632 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CAPNS1P04632 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CAPNS1P04632 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CAPNS1P04632 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CAPNS1P04632 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CAPNS1P04632 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.25■■□□□ 1.15
CAPNS1P04632 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CAPNS1P04632 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CAPNS1P04632 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CAPNS1P04632 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.25■■□□□ 1.15
CAPNS1P04632 AL137784.2-201ENST00000607332 1000 ntBASIC22.25■■□□□ 1.15
CAPNS1P04632 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CAPNS1P04632 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CAPNS1P04632 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CAPNS1P04632 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.24■■□□□ 1.15
CAPNS1P04632 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CAPNS1P04632 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CAPNS1P04632 ID1-201ENST00000376105 1233 ntBASIC22.24■■□□□ 1.15
CAPNS1P04632 MIR4767-201ENST00000582827 78 ntBASIC22.24■■□□□ 1.15
CAPNS1P04632 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.24■■□□□ 1.15
CAPNS1P04632 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
CAPNS1P04632 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CAPNS1P04632 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CAPNS1P04632 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CAPNS1P04632 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms