Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.74■□□□□ 0.59
GAPDHP04406 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.74■□□□□ 0.59
GAPDHP04406 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.74■□□□□ 0.59
GAPDHP04406 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GAPDHP04406 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
GAPDHP04406 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAPDHP04406 GUSBP5-202ENST00000510805 1989 ntBASIC18.73■□□□□ 0.59
GAPDHP04406 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
GAPDHP04406 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAPDHP04406 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
GAPDHP04406 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAPDHP04406 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAPDHP04406 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
GAPDHP04406 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAPDHP04406 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAPDHP04406 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAPDHP04406 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.72■□□□□ 0.59
GAPDHP04406 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.72■□□□□ 0.59
GAPDHP04406 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
GAPDHP04406 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.72■□□□□ 0.59
GAPDHP04406 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
GAPDHP04406 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAPDHP04406 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.72■□□□□ 0.59
GAPDHP04406 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAPDHP04406 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAPDHP04406 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.71■□□□□ 0.59
GAPDHP04406 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GAPDHP04406 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.71■□□□□ 0.59
GAPDHP04406 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GAPDHP04406 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.71■□□□□ 0.59
GAPDHP04406 AL161729.1-201ENST00000604104 1402 ntBASIC18.71■□□□□ 0.59
GAPDHP04406 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAPDHP04406 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GAPDHP04406 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAPDHP04406 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GAPDHP04406 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GAPDHP04406 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GAPDHP04406 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GAPDHP04406 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.7■□□□□ 0.58
GAPDHP04406 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GAPDHP04406 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GAPDHP04406 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GAPDHP04406 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
GAPDHP04406 AL022069.1-201ENST00000568025 1636 ntBASIC18.7■□□□□ 0.58
GAPDHP04406 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GAPDHP04406 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GAPDHP04406 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GAPDHP04406 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.69■□□□□ 0.58
GAPDHP04406 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.69■□□□□ 0.58
GAPDHP04406 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GAPDHP04406 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.69■□□□□ 0.58
GAPDHP04406 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.69■□□□□ 0.58
GAPDHP04406 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.69■□□□□ 0.58
GAPDHP04406 RARRES2P1-201ENST00000474487 481 ntBASIC18.69■□□□□ 0.58
GAPDHP04406 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.69■□□□□ 0.58
GAPDHP04406 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GAPDHP04406 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
GAPDHP04406 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GAPDHP04406 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GAPDHP04406 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GAPDHP04406 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GAPDHP04406 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.68■□□□□ 0.58
GAPDHP04406 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.68■□□□□ 0.58
GAPDHP04406 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GAPDHP04406 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GAPDHP04406 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.68■□□□□ 0.58
GAPDHP04406 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GAPDHP04406 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GAPDHP04406 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GAPDHP04406 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GAPDHP04406 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GAPDHP04406 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GAPDHP04406 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GAPDHP04406 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GAPDHP04406 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GAPDHP04406 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
GAPDHP04406 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
GAPDHP04406 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GAPDHP04406 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GAPDHP04406 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
GAPDHP04406 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.66■□□□□ 0.58
GAPDHP04406 DUSP8P3-201ENST00000399571 1760 ntBASIC18.66■□□□□ 0.58
GAPDHP04406 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GAPDHP04406 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms