Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC106739.1-201ENST00000617035 715 ntBASIC26.96■■□□□ 1.91
MBD4O95243 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
MBD4O95243 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.96■■□□□ 1.91
MBD4O95243 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.91
MBD4O95243 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
MBD4O95243 AC135279.3-201ENST00000610945 1311 ntBASIC26.95■■□□□ 1.91
MBD4O95243 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.9
MBD4O95243 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
MBD4O95243 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
MBD4O95243 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.95■■□□□ 1.9
MBD4O95243 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
MBD4O95243 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
MBD4O95243 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
MBD4O95243 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
MBD4O95243 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
MBD4O95243 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
MBD4O95243 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.94■■□□□ 1.9
MBD4O95243 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
MBD4O95243 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.94■■□□□ 1.9
MBD4O95243 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
MBD4O95243 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.94■■□□□ 1.9
MBD4O95243 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.94■■□□□ 1.9
MBD4O95243 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
MBD4O95243 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
MBD4O95243 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
MBD4O95243 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
MBD4O95243 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.93■■□□□ 1.9
MBD4O95243 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.93■■□□□ 1.9
MBD4O95243 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 AC093323.1-202ENST00000635031 2045 ntBASIC26.93■■□□□ 1.9
MBD4O95243 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
MBD4O95243 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MBD4O95243 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
MBD4O95243 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.92■■□□□ 1.9
MBD4O95243 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
MBD4O95243 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
MBD4O95243 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
MBD4O95243 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
MBD4O95243 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.92■■□□□ 1.9
MBD4O95243 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.92■■□□□ 1.9
MBD4O95243 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
MBD4O95243 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.91■■□□□ 1.9
MBD4O95243 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.91■■□□□ 1.9
MBD4O95243 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.91■■□□□ 1.9
MBD4O95243 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
MBD4O95243 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
MBD4O95243 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.9■■□□□ 1.9
MBD4O95243 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
MBD4O95243 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
MBD4O95243 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
MBD4O95243 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.9■■□□□ 1.9
MBD4O95243 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.9■■□□□ 1.9
MBD4O95243 MIR3181-201ENST00000578512 73 ntBASIC26.9■■□□□ 1.9
MBD4O95243 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
MBD4O95243 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
MBD4O95243 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.9■■□□□ 1.9
MBD4O95243 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
MBD4O95243 AC019069.1-201ENST00000610008 1333 ntBASIC26.9■■□□□ 1.9
MBD4O95243 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.89■■□□□ 1.9
MBD4O95243 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
MBD4O95243 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
MBD4O95243 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
MBD4O95243 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.89■■□□□ 1.9
MBD4O95243 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.89■■□□□ 1.9
MBD4O95243 AC133561.4-201ENST00000566112 224 ntBASIC26.89■■□□□ 1.9
MBD4O95243 AC005837.3-201ENST00000612163 286 ntBASIC26.89■■□□□ 1.9
MBD4O95243 AC144652.1-201ENST00000609974 1624 ntBASIC26.89■■□□□ 1.9
MBD4O95243 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
MBD4O95243 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
MBD4O95243 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.88■■□□□ 1.89
MBD4O95243 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
MBD4O95243 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
MBD4O95243 AC079630.1-202ENST00000618127 1840 ntBASIC26.88■■□□□ 1.89
MBD4O95243 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.87■■□□□ 1.89
MBD4O95243 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.87■■□□□ 1.89
MBD4O95243 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.87■■□□□ 1.89
MBD4O95243 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.87■■□□□ 1.89
MBD4O95243 MIR4767-201ENST00000582827 78 ntBASIC26.87■■□□□ 1.89
MBD4O95243 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.87■■□□□ 1.89
MBD4O95243 AL031432.3-201ENST00000607698 485 ntBASIC26.87■■□□□ 1.89
MBD4O95243 pRNA.6-201ENST00000610482 90 ntBASIC26.87■■□□□ 1.89
MBD4O95243 pRNA.5-201ENST00000612139 90 ntBASIC26.87■■□□□ 1.89
MBD4O95243 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.87■■□□□ 1.89
MBD4O95243 pRNA.11-201ENST00000618423 90 ntBASIC26.87■■□□□ 1.89
MBD4O95243 pRNA.13-201ENST00000619112 90 ntBASIC26.87■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms