Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.96■□□□□ 0.63
SPDEFO95238 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.96■□□□□ 0.63
SPDEFO95238 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.96■□□□□ 0.63
SPDEFO95238 ABHD17AP5-201ENST00000580133 923 ntBASIC18.96■□□□□ 0.63
SPDEFO95238 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPDEFO95238 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPDEFO95238 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPDEFO95238 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPDEFO95238 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPDEFO95238 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPDEFO95238 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SPDEFO95238 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPDEFO95238 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPDEFO95238 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPDEFO95238 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SPDEFO95238 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPDEFO95238 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SPDEFO95238 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.95■□□□□ 0.62
SPDEFO95238 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.95■□□□□ 0.62
SPDEFO95238 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
SPDEFO95238 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SPDEFO95238 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.94■□□□□ 0.62
SPDEFO95238 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPDEFO95238 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPDEFO95238 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPDEFO95238 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPDEFO95238 AL121603.2-201ENST00000557373 2117 ntBASIC18.94■□□□□ 0.62
SPDEFO95238 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPDEFO95238 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SPDEFO95238 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPDEFO95238 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SPDEFO95238 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPDEFO95238 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.93■□□□□ 0.62
SPDEFO95238 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPDEFO95238 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.93■□□□□ 0.62
SPDEFO95238 MIR6765-201ENST00000614092 87 ntBASIC18.93■□□□□ 0.62
SPDEFO95238 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPDEFO95238 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SPDEFO95238 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.93■□□□□ 0.62
SPDEFO95238 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
SPDEFO95238 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPDEFO95238 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPDEFO95238 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.92■□□□□ 0.62
SPDEFO95238 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SPDEFO95238 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPDEFO95238 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SPDEFO95238 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPDEFO95238 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPDEFO95238 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.92■□□□□ 0.62
SPDEFO95238 U85056.1-201ENST00000616429 682 ntBASIC18.92■□□□□ 0.62
SPDEFO95238 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPDEFO95238 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SPDEFO95238 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.92■□□□□ 0.62
SPDEFO95238 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPDEFO95238 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPDEFO95238 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPDEFO95238 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.92■□□□□ 0.62
SPDEFO95238 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDEFO95238 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDEFO95238 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDEFO95238 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDEFO95238 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.91■□□□□ 0.62
SPDEFO95238 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDEFO95238 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SPDEFO95238 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SPDEFO95238 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SPDEFO95238 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SPDEFO95238 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDEFO95238 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.91■□□□□ 0.62
SPDEFO95238 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.91■□□□□ 0.62
SPDEFO95238 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SPDEFO95238 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SPDEFO95238 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDEFO95238 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPDEFO95238 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.91■□□□□ 0.62
SPDEFO95238 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.91■□□□□ 0.62
SPDEFO95238 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDEFO95238 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SPDEFO95238 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPDEFO95238 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPDEFO95238 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPDEFO95238 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPDEFO95238 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SPDEFO95238 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SPDEFO95238 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.9■□□□□ 0.62
SPDEFO95238 RPS2P7-201ENST00000447334 885 ntBASIC18.9■□□□□ 0.62
SPDEFO95238 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.9■□□□□ 0.62
SPDEFO95238 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPDEFO95238 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPDEFO95238 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPDEFO95238 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.9■□□□□ 0.62
SPDEFO95238 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SPDEFO95238 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.89■□□□□ 0.61
SPDEFO95238 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPDEFO95238 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.89■□□□□ 0.61
SPDEFO95238 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SPDEFO95238 DUX4L9-201ENST00000449051 1259 ntBASIC18.89■□□□□ 0.61
SPDEFO95238 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPDEFO95238 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
SPDEFO95238 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms