Protein–RNA interactions for Protein: O60831

PRAF2, PRA1 family protein 2, humanhuman

Predictions only

Length 178 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2O60831 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAF2O60831 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAF2O60831 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PRAF2O60831 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PRAF2O60831 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAF2O60831 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.98■□□□□ 0.63
PRAF2O60831 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAF2O60831 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAF2O60831 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.97■□□□□ 0.63
PRAF2O60831 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.97■□□□□ 0.63
PRAF2O60831 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAF2O60831 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAF2O60831 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAF2O60831 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAF2O60831 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAF2O60831 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PRAF2O60831 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAF2O60831 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PRAF2O60831 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAF2O60831 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAF2O60831 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.97■□□□□ 0.63
PRAF2O60831 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAF2O60831 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.97■□□□□ 0.63
PRAF2O60831 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.97■□□□□ 0.63
PRAF2O60831 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAF2O60831 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
PRAF2O60831 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.96■□□□□ 0.63
PRAF2O60831 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAF2O60831 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.96■□□□□ 0.63
PRAF2O60831 AC126177.7-201ENST00000547904 679 ntBASIC18.96■□□□□ 0.63
PRAF2O60831 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAF2O60831 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAF2O60831 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAF2O60831 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.96■□□□□ 0.63
PRAF2O60831 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAF2O60831 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAF2O60831 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.96■□□□□ 0.63
PRAF2O60831 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PRAF2O60831 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.95■□□□□ 0.62
PRAF2O60831 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAF2O60831 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAF2O60831 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAF2O60831 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRAF2O60831 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PRAF2O60831 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAF2O60831 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.95■□□□□ 0.62
PRAF2O60831 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAF2O60831 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAF2O60831 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAF2O60831 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAF2O60831 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.94■□□□□ 0.62
PRAF2O60831 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.94■□□□□ 0.62
PRAF2O60831 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.94■□□□□ 0.62
PRAF2O60831 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.94■□□□□ 0.62
PRAF2O60831 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAF2O60831 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.94■□□□□ 0.62
PRAF2O60831 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAF2O60831 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAF2O60831 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAF2O60831 AC092667.1-201ENST00000434301 2586 ntBASIC18.94■□□□□ 0.62
PRAF2O60831 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
PRAF2O60831 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAF2O60831 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAF2O60831 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRAF2O60831 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PRAF2O60831 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAF2O60831 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAF2O60831 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAF2O60831 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PRAF2O60831 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAF2O60831 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PRAF2O60831 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAF2O60831 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAF2O60831 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PRAF2O60831 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAF2O60831 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRAF2O60831 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.92■□□□□ 0.62
PRAF2O60831 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRAF2O60831 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PRAF2O60831 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAF2O60831 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PRAF2O60831 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PRAF2O60831 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.91■□□□□ 0.62
PRAF2O60831 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAF2O60831 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PRAF2O60831 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRAF2O60831 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAF2O60831 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRAF2O60831 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAF2O60831 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAF2O60831 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAF2O60831 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAF2O60831 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAF2O60831 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAF2O60831 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PRAF2O60831 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAF2O60831 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRAF2O60831 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAF2O60831 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAF2O60831 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms