Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA1O15239 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA1O15239 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA1O15239 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA1O15239 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA1O15239 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA1O15239 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA1O15239 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA1O15239 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA1O15239 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA1O15239 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFA1O15239 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA1O15239 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
NDUFA1O15239 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA1O15239 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA1O15239 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
NDUFA1O15239 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NDUFA1O15239 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA1O15239 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA1O15239 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA1O15239 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA1O15239 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
NDUFA1O15239 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.34■□□□□ 0.05
NDUFA1O15239 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
NDUFA1O15239 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC15.34■□□□□ 0.05
NDUFA1O15239 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
NDUFA1O15239 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NDUFA1O15239 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA1O15239 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA1O15239 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
NDUFA1O15239 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA1O15239 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA1O15239 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFA1O15239 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NDUFA1O15239 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NDUFA1O15239 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NDUFA1O15239 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC15.33■□□□□ 0.05
NDUFA1O15239 AC009831.1-201ENST00000580420 1582 ntBASIC15.33■□□□□ 0.05
NDUFA1O15239 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFA1O15239 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.33■□□□□ 0.04
NDUFA1O15239 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFA1O15239 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFA1O15239 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFA1O15239 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.33■□□□□ 0.04
NDUFA1O15239 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NDUFA1O15239 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NDUFA1O15239 ESRRAP2-201ENST00000418437 1549 ntBASIC15.33■□□□□ 0.04
NDUFA1O15239 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA1O15239 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NDUFA1O15239 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA1O15239 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
NDUFA1O15239 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NDUFA1O15239 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA1O15239 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC15.32■□□□□ 0.04
NDUFA1O15239 AC018755.3-202ENST00000596210 929 ntBASIC15.32■□□□□ 0.04
NDUFA1O15239 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA1O15239 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA1O15239 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFA1O15239 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA1O15239 RNF126P1-201ENST00000567452 1320 ntBASIC15.32■□□□□ 0.04
NDUFA1O15239 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA1O15239 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA1O15239 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA1O15239 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA1O15239 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA1O15239 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA1O15239 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFA1O15239 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA1O15239 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFA1O15239 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.31■□□□□ 0.04
NDUFA1O15239 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA1O15239 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA1O15239 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA1O15239 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA1O15239 AL161729.1-201ENST00000604104 1402 ntBASIC15.31■□□□□ 0.04
NDUFA1O15239 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA1O15239 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFA1O15239 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.31■□□□□ 0.04
NDUFA1O15239 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFA1O15239 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA1O15239 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA1O15239 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA1O15239 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA1O15239 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA1O15239 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA1O15239 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA1O15239 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFA1O15239 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA1O15239 ABHD17AP3-201ENST00000503096 1137 ntBASIC15.3■□□□□ 0.04
NDUFA1O15239 EI24-213ENST00000618552 1747 ntTSL 5 BASIC15.3■□□□□ 0.04
NDUFA1O15239 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFA1O15239 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA1O15239 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NDUFA1O15239 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NDUFA1O15239 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms