Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV4S1A1TA0A5B7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV4S1A1TA0A5B7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TCRBV4S1A1TA0A5B7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TCRBV4S1A1TA0A5B7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV4S1A1TA0A5B7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV4S1A1TA0A5B7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TCRBV4S1A1TA0A5B7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV4S1A1TA0A5B7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TCRBV4S1A1TA0A5B7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV4S1A1TA0A5B7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18■□□□□ 0.47
TCRBV4S1A1TA0A5B7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18■□□□□ 0.47
TCRBV4S1A1TA0A5B7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18■□□□□ 0.47
TCRBV4S1A1TA0A5B7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18■□□□□ 0.47
TCRBV4S1A1TA0A5B7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV4S1A1TA0A5B7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV4S1A1TA0A5B7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 AC079834.2-201ENST00000609776 1949 ntBASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.99■□□□□ 0.47
TCRBV4S1A1TA0A5B7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 AL139246.5-201ENST00000606645 996 ntBASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
TCRBV4S1A1TA0A5B7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 AC004448.1-201ENST00000458332 883 ntBASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 MIR4466-201ENST00000606121 54 ntBASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 C9orf163-202ENST00000624034 2573 ntBASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
TCRBV4S1A1TA0A5B7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.96■□□□□ 0.47
TCRBV4S1A1TA0A5B7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TCRBV4S1A1TA0A5B7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.96■□□□□ 0.46
TCRBV4S1A1TA0A5B7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms