Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV23-1A0A0A0MS06 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV23-1A0A0A0MS06 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
TRBV23-1A0A0A0MS06 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRBV23-1A0A0A0MS06 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 MIR6724-1-201ENST00000616420 92 ntBASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 MIR6724-2-201ENST00000616483 92 ntBASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 MIR6724-4-201ENST00000617390 92 ntBASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 MIR6724-3-201ENST00000622482 92 ntBASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV23-1A0A0A0MS06 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV23-1A0A0A0MS06 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV23-1A0A0A0MS06 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV23-1A0A0A0MS06 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBV23-1A0A0A0MS06 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV23-1A0A0A0MS06 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV23-1A0A0A0MS06 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.86■□□□□ 0.61
TRBV23-1A0A0A0MS06 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV23-1A0A0A0MS06 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV23-1A0A0A0MS06 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV23-1A0A0A0MS06 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 AL356441.2-201ENST00000443009 864 ntBASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 AL121603.2-201ENST00000557373 2117 ntBASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRBV23-1A0A0A0MS06 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRBV23-1A0A0A0MS06 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV23-1A0A0A0MS06 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV23-1A0A0A0MS06 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV23-1A0A0A0MS06 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV23-1A0A0A0MS06 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV23-1A0A0A0MS06 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
TRBV23-1A0A0A0MS06 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV23-1A0A0A0MS06 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.83■□□□□ 0.61
TRBV23-1A0A0A0MS06 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.83■□□□□ 0.61
TRBV23-1A0A0A0MS06 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
TRBV23-1A0A0A0MS06 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV23-1A0A0A0MS06 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRBV23-1A0A0A0MS06 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.83■□□□□ 0.6
TRBV23-1A0A0A0MS06 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.83■□□□□ 0.6
TRBV23-1A0A0A0MS06 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV23-1A0A0A0MS06 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TRBV23-1A0A0A0MS06 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV23-1A0A0A0MS06 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV23-1A0A0A0MS06 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV23-1A0A0A0MS06 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.83■□□□□ 0.6
TRBV23-1A0A0A0MS06 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.82■□□□□ 0.6
TRBV23-1A0A0A0MS06 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
TRBV23-1A0A0A0MS06 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRBV23-1A0A0A0MS06 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV23-1A0A0A0MS06 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV23-1A0A0A0MS06 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV23-1A0A0A0MS06 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.81■□□□□ 0.6
TRBV23-1A0A0A0MS06 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.81■□□□□ 0.6
TRBV23-1A0A0A0MS06 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.81■□□□□ 0.6
TRBV23-1A0A0A0MS06 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV23-1A0A0A0MS06 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV23-1A0A0A0MS06 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.81■□□□□ 0.6
TRBV23-1A0A0A0MS06 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV23-1A0A0A0MS06 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV23-1A0A0A0MS06 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV23-1A0A0A0MS06 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.8■□□□□ 0.6
TRBV23-1A0A0A0MS06 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV23-1A0A0A0MS06 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV23-1A0A0A0MS06 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRBV23-1A0A0A0MS06 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRBV23-1A0A0A0MS06 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.8■□□□□ 0.6
TRBV23-1A0A0A0MS06 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV23-1A0A0A0MS06 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV23-1A0A0A0MS06 AC004812.2-201ENST00000611079 2094 ntBASIC18.8■□□□□ 0.6
TRBV23-1A0A0A0MS06 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV23-1A0A0A0MS06 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRBV23-1A0A0A0MS06 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV23-1A0A0A0MS06 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms