Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AC136469.2-201ENST00000623944 1028 ntBASIC21.94■■□□□ 1.1
LRIT1Q9P2V4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRIT1Q9P2V4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRIT1Q9P2V4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRIT1Q9P2V4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRIT1Q9P2V4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRIT1Q9P2V4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LRIT1Q9P2V4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.93■■□□□ 1.1
LRIT1Q9P2V4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRIT1Q9P2V4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LRIT1Q9P2V4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.93■■□□□ 1.1
LRIT1Q9P2V4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.92■■□□□ 1.1
LRIT1Q9P2V4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRIT1Q9P2V4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRIT1Q9P2V4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRIT1Q9P2V4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRIT1Q9P2V4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
LRIT1Q9P2V4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.91■■□□□ 1.1
LRIT1Q9P2V4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRIT1Q9P2V4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRIT1Q9P2V4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRIT1Q9P2V4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRIT1Q9P2V4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.91■■□□□ 1.1
LRIT1Q9P2V4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.91■■□□□ 1.1
LRIT1Q9P2V4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRIT1Q9P2V4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRIT1Q9P2V4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.9■■□□□ 1.1
LRIT1Q9P2V4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
LRIT1Q9P2V4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LRIT1Q9P2V4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRIT1Q9P2V4 AC099791.1-201ENST00000416440 715 ntBASIC21.9■■□□□ 1.1
LRIT1Q9P2V4 AC026271.2-201ENST00000428091 497 ntBASIC21.9■■□□□ 1.1
LRIT1Q9P2V4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRIT1Q9P2V4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRIT1Q9P2V4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRIT1Q9P2V4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.89■■□□□ 1.09
LRIT1Q9P2V4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LRIT1Q9P2V4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.89■■□□□ 1.09
LRIT1Q9P2V4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.89■■□□□ 1.09
LRIT1Q9P2V4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
LRIT1Q9P2V4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRIT1Q9P2V4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
LRIT1Q9P2V4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRIT1Q9P2V4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRIT1Q9P2V4 AC142381.3-201ENST00000568208 1670 ntBASIC21.88■■□□□ 1.09
LRIT1Q9P2V4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
LRIT1Q9P2V4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
LRIT1Q9P2V4 AC138932.3-201ENST00000567634 1902 ntBASIC21.88■■□□□ 1.09
LRIT1Q9P2V4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRIT1Q9P2V4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.88■■□□□ 1.09
LRIT1Q9P2V4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.88■■□□□ 1.09
LRIT1Q9P2V4 pRNA.6-201ENST00000610482 90 ntBASIC21.88■■□□□ 1.09
LRIT1Q9P2V4 pRNA.5-201ENST00000612139 90 ntBASIC21.88■■□□□ 1.09
LRIT1Q9P2V4 pRNA.11-201ENST00000618423 90 ntBASIC21.88■■□□□ 1.09
LRIT1Q9P2V4 pRNA.13-201ENST00000619112 90 ntBASIC21.88■■□□□ 1.09
LRIT1Q9P2V4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRIT1Q9P2V4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.88■■□□□ 1.09
LRIT1Q9P2V4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRIT1Q9P2V4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT1Q9P2V4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT1Q9P2V4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT1Q9P2V4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.87■■□□□ 1.09
LRIT1Q9P2V4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.87■■□□□ 1.09
LRIT1Q9P2V4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT1Q9P2V4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT1Q9P2V4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT1Q9P2V4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.87■■□□□ 1.09
LRIT1Q9P2V4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT1Q9P2V4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT1Q9P2V4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRIT1Q9P2V4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.86■■□□□ 1.09
LRIT1Q9P2V4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRIT1Q9P2V4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.86■■□□□ 1.09
LRIT1Q9P2V4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.86■■□□□ 1.09
LRIT1Q9P2V4 AC233992.3-201ENST00000607491 485 ntBASIC21.86■■□□□ 1.09
LRIT1Q9P2V4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRIT1Q9P2V4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRIT1Q9P2V4 AC141586.4-201ENST00000624558 1573 ntBASIC21.86■■□□□ 1.09
LRIT1Q9P2V4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRIT1Q9P2V4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.85■■□□□ 1.09
LRIT1Q9P2V4 BX842568.3-201ENST00000418104 571 ntBASIC21.85■■□□□ 1.09
LRIT1Q9P2V4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.85■■□□□ 1.09
LRIT1Q9P2V4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
LRIT1Q9P2V4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.85■■□□□ 1.09
LRIT1Q9P2V4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRIT1Q9P2V4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
LRIT1Q9P2V4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRIT1Q9P2V4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.85■■□□□ 1.09
LRIT1Q9P2V4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRIT1Q9P2V4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRIT1Q9P2V4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
LRIT1Q9P2V4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
LRIT1Q9P2V4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.84■■□□□ 1.09
LRIT1Q9P2V4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRIT1Q9P2V4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
LRIT1Q9P2V4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.84■■□□□ 1.09
LRIT1Q9P2V4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRIT1Q9P2V4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRIT1Q9P2V4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.83■■□□□ 1.09
LRIT1Q9P2V4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 1143.9 ms