Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.4■□□□□ 0.86
ZNF407Q9C0G0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF407Q9C0G0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF407Q9C0G0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF407Q9C0G0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF407Q9C0G0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF407Q9C0G0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.39■□□□□ 0.86
ZNF407Q9C0G0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF407Q9C0G0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.39■□□□□ 0.85
ZNF407Q9C0G0 AL161729.1-201ENST00000604104 1402 ntBASIC20.39■□□□□ 0.85
ZNF407Q9C0G0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.39■□□□□ 0.85
ZNF407Q9C0G0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF407Q9C0G0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
ZNF407Q9C0G0 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.38■□□□□ 0.85
ZNF407Q9C0G0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF407Q9C0G0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF407Q9C0G0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF407Q9C0G0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.38■□□□□ 0.85
ZNF407Q9C0G0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.37■□□□□ 0.85
ZNF407Q9C0G0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF407Q9C0G0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF407Q9C0G0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.36■□□□□ 0.85
ZNF407Q9C0G0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF407Q9C0G0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.36■□□□□ 0.85
ZNF407Q9C0G0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF407Q9C0G0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF407Q9C0G0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF407Q9C0G0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF407Q9C0G0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF407Q9C0G0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF407Q9C0G0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF407Q9C0G0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF407Q9C0G0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.34■□□□□ 0.85
ZNF407Q9C0G0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.34■□□□□ 0.85
ZNF407Q9C0G0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF407Q9C0G0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF407Q9C0G0 AC142381.3-201ENST00000568208 1670 ntBASIC20.34■□□□□ 0.85
ZNF407Q9C0G0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF407Q9C0G0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ZNF407Q9C0G0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.34■□□□□ 0.85
ZNF407Q9C0G0 AC008764.7-201ENST00000593779 1081 ntBASIC20.34■□□□□ 0.85
ZNF407Q9C0G0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.33■□□□□ 0.85
ZNF407Q9C0G0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ZNF407Q9C0G0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF407Q9C0G0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF407Q9C0G0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.33■□□□□ 0.85
ZNF407Q9C0G0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.33■□□□□ 0.85
ZNF407Q9C0G0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.33■□□□□ 0.85
ZNF407Q9C0G0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
ZNF407Q9C0G0 LINC00543-201ENST00000567234 1845 ntBASIC20.33■□□□□ 0.84
ZNF407Q9C0G0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF407Q9C0G0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.33■□□□□ 0.84
ZNF407Q9C0G0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
ZNF407Q9C0G0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
ZNF407Q9C0G0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ZNF407Q9C0G0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.33■□□□□ 0.84
ZNF407Q9C0G0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF407Q9C0G0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF407Q9C0G0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF407Q9C0G0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF407Q9C0G0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF407Q9C0G0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF407Q9C0G0 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF407Q9C0G0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF407Q9C0G0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF407Q9C0G0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF407Q9C0G0 AC091305.1-201ENST00000479476 895 ntBASIC20.31■□□□□ 0.84
ZNF407Q9C0G0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF407Q9C0G0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
ZNF407Q9C0G0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF407Q9C0G0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms