Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SDF2Q99470 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.92■□□□□ 0.94
SDF2Q99470 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.92■□□□□ 0.94
SDF2Q99470 AC068473.5-201ENST00000616428 2072 ntBASIC20.92■□□□□ 0.94
SDF2Q99470 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SDF2Q99470 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.92■□□□□ 0.94
SDF2Q99470 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.92■□□□□ 0.94
SDF2Q99470 KRT125P-201ENST00000546827 989 ntBASIC20.92■□□□□ 0.94
SDF2Q99470 AC092028.1-203ENST00000608262 953 ntBASIC20.92■□□□□ 0.94
SDF2Q99470 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SDF2Q99470 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SDF2Q99470 DUSP8P3-201ENST00000399571 1760 ntBASIC20.92■□□□□ 0.94
SDF2Q99470 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SDF2Q99470 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SDF2Q99470 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SDF2Q99470 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SDF2Q99470 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SDF2Q99470 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SDF2Q99470 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SDF2Q99470 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.91■□□□□ 0.94
SDF2Q99470 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.91■□□□□ 0.94
SDF2Q99470 AC009299.2-201ENST00000482477 511 ntBASIC20.91■□□□□ 0.94
SDF2Q99470 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.91■□□□□ 0.94
SDF2Q99470 C9orf163-202ENST00000624034 2573 ntBASIC20.91■□□□□ 0.94
SDF2Q99470 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SDF2Q99470 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SDF2Q99470 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.9■□□□□ 0.94
SDF2Q99470 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SDF2Q99470 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SDF2Q99470 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SDF2Q99470 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.9■□□□□ 0.94
SDF2Q99470 AL451085.2-201ENST00000605085 799 ntBASIC20.9■□□□□ 0.94
SDF2Q99470 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
SDF2Q99470 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SDF2Q99470 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
SDF2Q99470 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SDF2Q99470 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SDF2Q99470 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.89■□□□□ 0.94
SDF2Q99470 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SDF2Q99470 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.89■□□□□ 0.93
SDF2Q99470 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SDF2Q99470 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SDF2Q99470 AC239859.2-201ENST00000444165 318 ntBASIC20.89■□□□□ 0.93
SDF2Q99470 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SDF2Q99470 AC133561.1-201ENST00000568600 2415 ntBASIC20.89■□□□□ 0.93
SDF2Q99470 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SDF2Q99470 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SDF2Q99470 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SDF2Q99470 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
SDF2Q99470 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SDF2Q99470 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SDF2Q99470 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SDF2Q99470 MIR4787-201ENST00000607364 84 ntBASIC20.88■□□□□ 0.93
SDF2Q99470 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.88■□□□□ 0.93
SDF2Q99470 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SDF2Q99470 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.88■□□□□ 0.93
SDF2Q99470 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.88■□□□□ 0.93
SDF2Q99470 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SDF2Q99470 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.87■□□□□ 0.93
SDF2Q99470 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SDF2Q99470 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SDF2Q99470 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
SDF2Q99470 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.87■□□□□ 0.93
SDF2Q99470 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.87■□□□□ 0.93
SDF2Q99470 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SDF2Q99470 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SDF2Q99470 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.87■□□□□ 0.93
SDF2Q99470 AC079630.1-202ENST00000618127 1840 ntBASIC20.87■□□□□ 0.93
SDF2Q99470 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
SDF2Q99470 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SDF2Q99470 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.87■□□□□ 0.93
SDF2Q99470 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SDF2Q99470 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SDF2Q99470 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SDF2Q99470 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SDF2Q99470 AC005703.6-201ENST00000623265 1329 ntBASIC20.86■□□□□ 0.93
SDF2Q99470 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SDF2Q99470 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SDF2Q99470 AC012676.1-201ENST00000574705 1949 ntBASIC20.86■□□□□ 0.93
SDF2Q99470 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SDF2Q99470 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SDF2Q99470 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SDF2Q99470 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.85■□□□□ 0.93
SDF2Q99470 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
SDF2Q99470 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.85■□□□□ 0.93
SDF2Q99470 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SDF2Q99470 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SDF2Q99470 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SDF2Q99470 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SDF2Q99470 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SDF2Q99470 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SDF2Q99470 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SDF2Q99470 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.84■□□□□ 0.93
SDF2Q99470 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SDF2Q99470 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SDF2Q99470 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SDF2Q99470 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SDF2Q99470 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SDF2Q99470 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SDF2Q99470 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms