Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 BX664725.1-201ENST00000438252 379 ntBASIC18.57■□□□□ 0.56
R3HDM4Q96D70 AC022616.5-201ENST00000518796 181 ntBASIC18.57■□□□□ 0.56
R3HDM4Q96D70 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
R3HDM4Q96D70 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HDM4Q96D70 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HDM4Q96D70 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HDM4Q96D70 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HDM4Q96D70 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.55■□□□□ 0.56
R3HDM4Q96D70 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HDM4Q96D70 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
R3HDM4Q96D70 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HDM4Q96D70 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HDM4Q96D70 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
R3HDM4Q96D70 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3HDM4Q96D70 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
R3HDM4Q96D70 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.55■□□□□ 0.56
R3HDM4Q96D70 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 AL024507.2-201ENST00000606070 2574 ntBASIC18.54■□□□□ 0.56
R3HDM4Q96D70 AC019069.1-201ENST00000610008 1333 ntBASIC18.54■□□□□ 0.56
R3HDM4Q96D70 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.54■□□□□ 0.56
R3HDM4Q96D70 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.54■□□□□ 0.56
R3HDM4Q96D70 ANOS2P-203ENST00000472227 1816 ntBASIC18.53■□□□□ 0.56
R3HDM4Q96D70 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3HDM4Q96D70 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
R3HDM4Q96D70 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3HDM4Q96D70 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.53■□□□□ 0.56
R3HDM4Q96D70 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3HDM4Q96D70 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3HDM4Q96D70 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3HDM4Q96D70 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.53■□□□□ 0.56
R3HDM4Q96D70 MIR4787-201ENST00000607364 84 ntBASIC18.53■□□□□ 0.56
R3HDM4Q96D70 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.53■□□□□ 0.56
R3HDM4Q96D70 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
R3HDM4Q96D70 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
R3HDM4Q96D70 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
R3HDM4Q96D70 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
R3HDM4Q96D70 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms