Protein–RNA interactions for Protein: Q96A46

SLC25A28, Mitoferrin-2, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A28Q96A46 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC25A28Q96A46 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC25A28Q96A46 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC25A28Q96A46 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SLC25A28Q96A46 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SLC25A28Q96A46 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC25A28Q96A46 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC25A28Q96A46 MIR4508-201ENST00000584178 70 ntBASIC19.59■□□□□ 0.73
SLC25A28Q96A46 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC25A28Q96A46 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
SLC25A28Q96A46 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC25A28Q96A46 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC25A28Q96A46 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.58■□□□□ 0.73
SLC25A28Q96A46 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC25A28Q96A46 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC25A28Q96A46 AC103834.1-201ENST00000520383 144 ntBASIC19.58■□□□□ 0.72
SLC25A28Q96A46 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC25A28Q96A46 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC25A28Q96A46 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC25A28Q96A46 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC25A28Q96A46 LINC00526-201ENST00000581067 1875 ntBASIC19.58■□□□□ 0.72
SLC25A28Q96A46 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SLC25A28Q96A46 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC25A28Q96A46 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC25A28Q96A46 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC25A28Q96A46 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC25A28Q96A46 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC25A28Q96A46 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC25A28Q96A46 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC25A28Q96A46 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.57■□□□□ 0.72
SLC25A28Q96A46 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.57■□□□□ 0.72
SLC25A28Q96A46 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC25A28Q96A46 GUSBP5-202ENST00000510805 1989 ntBASIC19.57■□□□□ 0.72
SLC25A28Q96A46 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC25A28Q96A46 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC25A28Q96A46 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC25A28Q96A46 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC25A28Q96A46 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC25A28Q96A46 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SLC25A28Q96A46 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC25A28Q96A46 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC25A28Q96A46 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
SLC25A28Q96A46 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC25A28Q96A46 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC25A28Q96A46 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC25A28Q96A46 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC25A28Q96A46 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC25A28Q96A46 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC25A28Q96A46 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC25A28Q96A46 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A28Q96A46 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A28Q96A46 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A28Q96A46 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A28Q96A46 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A28Q96A46 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A28Q96A46 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A28Q96A46 AL592295.1-201ENST00000400984 884 ntBASIC19.55■□□□□ 0.72
SLC25A28Q96A46 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A28Q96A46 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A28Q96A46 PVT1_1.1-201ENST00000615125 194 ntBASIC19.55■□□□□ 0.72
SLC25A28Q96A46 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A28Q96A46 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SLC25A28Q96A46 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A28Q96A46 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC25A28Q96A46 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC25A28Q96A46 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC25A28Q96A46 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SLC25A28Q96A46 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC25A28Q96A46 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC25A28Q96A46 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC25A28Q96A46 AL031848.2-201ENST00000607670 837 ntBASIC19.54■□□□□ 0.72
SLC25A28Q96A46 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
SLC25A28Q96A46 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC25A28Q96A46 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SLC25A28Q96A46 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC25A28Q96A46 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC25A28Q96A46 ECEL1P1-201ENST00000373592 1742 ntBASIC19.54■□□□□ 0.72
SLC25A28Q96A46 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC25A28Q96A46 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A28Q96A46 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A28Q96A46 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A28Q96A46 AL024507.2-201ENST00000606070 2574 ntBASIC19.52■□□□□ 0.72
SLC25A28Q96A46 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A28Q96A46 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms