Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.72■□□□□ 0.43
LINC01006Q8NI28 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC01006Q8NI28 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01006Q8NI28 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC01006Q8NI28 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01006Q8NI28 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
LINC01006Q8NI28 TSPY26P-201ENST00000476365 1326 ntBASIC17.71■□□□□ 0.42
LINC01006Q8NI28 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
LINC01006Q8NI28 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01006Q8NI28 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.7■□□□□ 0.42
LINC01006Q8NI28 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.7■□□□□ 0.42
LINC01006Q8NI28 AC034268.1-201ENST00000441047 882 ntBASIC17.7■□□□□ 0.42
LINC01006Q8NI28 SLC47A1P1-202ENST00000449666 945 ntBASIC17.7■□□□□ 0.42
LINC01006Q8NI28 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.7■□□□□ 0.42
LINC01006Q8NI28 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
LINC01006Q8NI28 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LINC01006Q8NI28 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC01006Q8NI28 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01006Q8NI28 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01006Q8NI28 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.69■□□□□ 0.42
LINC01006Q8NI28 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC01006Q8NI28 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.69■□□□□ 0.42
LINC01006Q8NI28 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC01006Q8NI28 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01006Q8NI28 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC01006Q8NI28 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LINC01006Q8NI28 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.69■□□□□ 0.42
LINC01006Q8NI28 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01006Q8NI28 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC01006Q8NI28 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01006Q8NI28 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01006Q8NI28 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LINC01006Q8NI28 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LINC01006Q8NI28 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01006Q8NI28 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.68■□□□□ 0.42
LINC01006Q8NI28 YBX1P1-201ENST00000445822 960 ntBASIC17.68■□□□□ 0.42
LINC01006Q8NI28 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.68■□□□□ 0.42
LINC01006Q8NI28 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.68■□□□□ 0.42
LINC01006Q8NI28 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01006Q8NI28 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.68■□□□□ 0.42
LINC01006Q8NI28 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01006Q8NI28 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01006Q8NI28 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01006Q8NI28 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LINC01006Q8NI28 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC01006Q8NI28 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.67■□□□□ 0.42
LINC01006Q8NI28 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.67■□□□□ 0.42
LINC01006Q8NI28 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC01006Q8NI28 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
LINC01006Q8NI28 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC01006Q8NI28 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01006Q8NI28 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01006Q8NI28 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01006Q8NI28 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LINC01006Q8NI28 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01006Q8NI28 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01006Q8NI28 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01006Q8NI28 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.66■□□□□ 0.42
LINC01006Q8NI28 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01006Q8NI28 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.66■□□□□ 0.42
LINC01006Q8NI28 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.66■□□□□ 0.42
LINC01006Q8NI28 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.66■□□□□ 0.42
LINC01006Q8NI28 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01006Q8NI28 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01006Q8NI28 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01006Q8NI28 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01006Q8NI28 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01006Q8NI28 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC01006Q8NI28 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.65■□□□□ 0.42
LINC01006Q8NI28 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
LINC01006Q8NI28 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01006Q8NI28 AL358852.1-201ENST00000623174 1268 ntBASIC17.65■□□□□ 0.42
LINC01006Q8NI28 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01006Q8NI28 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.64■□□□□ 0.42
LINC01006Q8NI28 AC133637.1-201ENST00000624115 1537 ntBASIC17.64■□□□□ 0.41
LINC01006Q8NI28 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01006Q8NI28 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.64■□□□□ 0.41
LINC01006Q8NI28 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01006Q8NI28 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01006Q8NI28 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC01006Q8NI28 IGHV3-19-201ENST00000521488 291 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms