Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.78■□□□□ 0.92
SMIM11AP58511 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SMIM11AP58511 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM11AP58511 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM11AP58511 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.78■□□□□ 0.92
SMIM11AP58511 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.78■□□□□ 0.92
SMIM11AP58511 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
SMIM11AP58511 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM11AP58511 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM11AP58511 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SMIM11AP58511 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SMIM11AP58511 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
SMIM11AP58511 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM11AP58511 AC019171.1-201ENST00000601251 1056 ntBASIC20.77■□□□□ 0.92
SMIM11AP58511 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.77■□□□□ 0.92
SMIM11AP58511 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM11AP58511 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM11AP58511 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM11AP58511 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM11AP58511 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.76■□□□□ 0.91
SMIM11AP58511 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM11AP58511 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.76■□□□□ 0.91
SMIM11AP58511 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM11AP58511 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.76■□□□□ 0.91
SMIM11AP58511 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.76■□□□□ 0.91
SMIM11AP58511 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM11AP58511 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.76■□□□□ 0.91
SMIM11AP58511 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
SMIM11AP58511 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SMIM11AP58511 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SMIM11AP58511 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM11AP58511 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM11AP58511 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.75■□□□□ 0.91
SMIM11AP58511 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM11AP58511 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.75■□□□□ 0.91
SMIM11AP58511 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM11AP58511 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM11AP58511 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM11AP58511 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM11AP58511 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM11AP58511 GUSBP5-202ENST00000510805 1989 ntBASIC20.74■□□□□ 0.91
SMIM11AP58511 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM11AP58511 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SMIM11AP58511 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM11AP58511 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM11AP58511 AC129492.7-201ENST00000622992 756 ntBASIC20.74■□□□□ 0.91
SMIM11AP58511 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM11AP58511 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM11AP58511 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM11AP58511 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM11AP58511 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.73■□□□□ 0.91
SMIM11AP58511 ESRRAP2-201ENST00000418437 1549 ntBASIC20.73■□□□□ 0.91
SMIM11AP58511 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM11AP58511 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
SMIM11AP58511 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM11AP58511 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.73■□□□□ 0.91
SMIM11AP58511 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM11AP58511 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.73■□□□□ 0.91
SMIM11AP58511 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM11AP58511 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM11AP58511 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM11AP58511 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM11AP58511 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM11AP58511 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM11AP58511 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM11AP58511 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SMIM11AP58511 AC127496.7-201ENST00000625110 1798 ntBASIC20.72■□□□□ 0.91
SMIM11AP58511 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SMIM11AP58511 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM11AP58511 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SMIM11AP58511 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM11AP58511 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM11AP58511 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.72■□□□□ 0.91
SMIM11AP58511 LINC00526-201ENST00000581067 1875 ntBASIC20.72■□□□□ 0.91
SMIM11AP58511 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM11AP58511 ECEL1P1-201ENST00000373592 1742 ntBASIC20.72■□□□□ 0.91
SMIM11AP58511 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.72■□□□□ 0.91
SMIM11AP58511 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
SMIM11AP58511 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMIM11AP58511 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMIM11AP58511 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.71■□□□□ 0.91
SMIM11AP58511 RARRES2P2-201ENST00000394842 485 ntBASIC20.71■□□□□ 0.91
SMIM11AP58511 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.71■□□□□ 0.91
SMIM11AP58511 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.71■□□□□ 0.91
SMIM11AP58511 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.71■□□□□ 0.91
SMIM11AP58511 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SMIM11AP58511 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMIM11AP58511 EP400NL-214ENST00000641289 2402 ntBASIC20.7■□□□□ 0.91
SMIM11AP58511 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM11AP58511 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM11AP58511 U85056.1-201ENST00000616429 682 ntBASIC20.7■□□□□ 0.9
SMIM11AP58511 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM11AP58511 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM11AP58511 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM11AP58511 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM11AP58511 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM11AP58511 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SMIM11AP58511 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SMIM11AP58511 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM11AP58511 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms