Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 tK(CUU)D1tK(CUU)D1 73 nt6.12□□□□□ -1.43
SSM4P40318 tK(CUU)D2tK(CUU)D2 73 nt6.12□□□□□ -1.43
SSM4P40318 tK(CUU)E1tK(CUU)E1 73 nt6.12□□□□□ -1.43
SSM4P40318 tK(CUU)E2tK(CUU)E2 73 nt6.12□□□□□ -1.43
SSM4P40318 tK(CUU)FtK(CUU)F 73 nt6.12□□□□□ -1.43
SSM4P40318 tK(CUU)G1tK(CUU)G1 73 nt6.12□□□□□ -1.43
SSM4P40318 tK(CUU)G2tK(CUU)G2 73 nt6.12□□□□□ -1.43
SSM4P40318 tK(CUU)G3tK(CUU)G3 73 nt6.12□□□□□ -1.43
SSM4P40318 tK(CUU)ItK(CUU)I 73 nt6.12□□□□□ -1.43
SSM4P40318 tK(CUU)JtK(CUU)J 73 nt6.12□□□□□ -1.43
SSM4P40318 tK(CUU)KtK(CUU)K 73 nt6.12□□□□□ -1.43
SSM4P40318 tK(CUU)MtK(CUU)M 73 nt6.12□□□□□ -1.43
SSM4P40318 tK(CUU)PtK(CUU)P 73 nt6.12□□□□□ -1.43
SSM4P40318 BUD13YGL174W 801 nt6.12□□□□□ -1.43
SSM4P40318 YHR095WYHR095W 495 nt6.12□□□□□ -1.43
SSM4P40318 NPT1YOR209C 1290 nt6.12□□□□□ -1.43
SSM4P40318 ACC1YNR016C 6702 nt6.12□□□□□ -1.43
SSM4P40318 YDL228CYDL228C 642 nt6.11□□□□□ -1.43
SSM4P40318 PIC2YER053C 903 nt6.11□□□□□ -1.43
SSM4P40318 CDC42YLR229C 576 nt6.11□□□□□ -1.43
SSM4P40318 YPL071CYPL071C 471 nt6.11□□□□□ -1.43
SSM4P40318 CTT1YGR088W 1689 nt6.11□□□□□ -1.43
SSM4P40318 WTM1YOR230W 1314 nt6.1□□□□□ -1.43
SSM4P40318 RPC53YDL150W 1269 nt6.1□□□□□ -1.43
SSM4P40318 ENT5YDR153C 1236 nt6.1□□□□□ -1.43
SSM4P40318 PML1YLR016C 615 nt6.1□□□□□ -1.43
SSM4P40318 SEC17YBL050W 879 nt6.1□□□□□ -1.43
SSM4P40318 YNL108CYNL108C 813 nt6.1□□□□□ -1.43
SSM4P40318 YPS7YDR349C 1791 nt6.1□□□□□ -1.43
SSM4P40318 YDR056CYDR056C 618 nt6.09□□□□□ -1.43
SSM4P40318 PCL6YER059W 1263 nt6.09□□□□□ -1.43
SSM4P40318 TEF4YKL081W 1239 nt6.09□□□□□ -1.43
SSM4P40318 CNB1YKL190W 528 nt6.09□□□□□ -1.43
SSM4P40318 PMT2YAL023C 2280 nt6.09□□□□□ -1.43
SSM4P40318 tL(UAG)JtL(UAG)J 82 nt6.08□□□□□ -1.44
SSM4P40318 tL(UAG)L1tL(UAG)L1 82 nt6.08□□□□□ -1.44
SSM4P40318 tL(UAG)L2tL(UAG)L2 82 nt6.08□□□□□ -1.44
SSM4P40318 MRPL25YGR076C 474 nt6.08□□□□□ -1.44
SSM4P40318 PXR1YGR280C 816 nt6.08□□□□□ -1.44
SSM4P40318 MUM3YOR298W 1440 nt6.08□□□□□ -1.44
SSM4P40318 RXT3YDL076C 885 nt6.07□□□□□ -1.44
SSM4P40318 MMS21YEL019C 804 nt6.07□□□□□ -1.44
SSM4P40318 EFB1YAL003W 621 nt6.07□□□□□ -1.44
SSM4P40318 RDN5-1RDN5-1 121 nt6.07□□□□□ -1.44
SSM4P40318 PER33YLR064W 822 nt6.07□□□□□ -1.44
SSM4P40318 YAR030CYAR030C 342 nt6.07□□□□□ -1.44
SSM4P40318 RDN5-6RDN5-6 121 nt6.07□□□□□ -1.44
SSM4P40318 FLC1YPL221W 2382 nt6.06□□□□□ -1.44
SSM4P40318 HST4YDR191W 1113 nt6.06□□□□□ -1.44
SSM4P40318 ARP1YHR129C 1155 nt6.06□□□□□ -1.44
SSM4P40318 RAD27YKL113C 1149 nt6.06□□□□□ -1.44
SSM4P40318 CSR1YLR380W 1227 nt6.06□□□□□ -1.44
SSM4P40318 YOL035CYOL035C 303 nt6.06□□□□□ -1.44
SSM4P40318 FAR10YLR238W 1437 nt6.06□□□□□ -1.44
SSM4P40318 CLF1YLR117C 2064 nt6.06□□□□□ -1.44
SSM4P40318 YCR023CYCR023C 1836 nt6.06□□□□□ -1.44
SSM4P40318 RBA50YDR527W 1320 nt6.06□□□□□ -1.44
SSM4P40318 ADY3YDL239C 2373 nt6.05□□□□□ -1.44
SSM4P40318 DUG1YFR044C 1446 nt6.05□□□□□ -1.44
SSM4P40318 YML031C-AYML031C-A 336 nt6.05□□□□□ -1.44
SSM4P40318 MSK1YNL073W 1731 nt6.05□□□□□ -1.44
SSM4P40318 RPC19YNL113W 429 nt6.05□□□□□ -1.44
SSM4P40318 KAP114YGL241W 3015 nt6.05□□□□□ -1.44
SSM4P40318 RIM15YFL033C 5313 nt6.05□□□□□ -1.44
SSM4P40318 YNL181WYNL181W 1224 nt6.04□□□□□ -1.44
SSM4P40318 LDB19YOR322C 2457 nt6.04□□□□□ -1.44
SSM4P40318 HOYDL227C 1761 nt6.03□□□□□ -1.44
SSM4P40318 HSP30YCR021C 999 nt6.03□□□□□ -1.44
SSM4P40318 SPO12YHR152W 522 nt6.03□□□□□ -1.44
SSM4P40318 OSW5YMR148W 447 nt6.03□□□□□ -1.44
SSM4P40318 snR19snR19 568 nt6.03□□□□□ -1.44
SSM4P40318 KIN2YLR096W 3444 nt6.03□□□□□ -1.44
SSM4P40318 SET5YHR207C 1581 nt6.03□□□□□ -1.44
SSM4P40318 PEX30YLR324W 1572 nt6.03□□□□□ -1.44
SSM4P40318 HOS1YPR068C 1413 nt6.03□□□□□ -1.44
SSM4P40318 RFU1YLR073C 603 nt6.02□□□□□ -1.45
SSM4P40318 HEK2YBL032W 1146 nt6.02□□□□□ -1.45
SSM4P40318 SLD2YKL108W 1362 nt6.02□□□□□ -1.45
SSM4P40318 RSC58YLR033W 1509 nt6.02□□□□□ -1.45
SSM4P40318 GDB1YPR184W 4611 nt6.02□□□□□ -1.45
SSM4P40318 ASP1YDR321W 1146 nt6.01□□□□□ -1.45
SSM4P40318 IRC22YEL001C 678 nt6.01□□□□□ -1.45
SSM4P40318 HPM1YIL110W 1134 nt6.01□□□□□ -1.45
SSM4P40318 YJL215CYJL215C 360 nt6.01□□□□□ -1.45
SSM4P40318 VPS68YOL129W 555 nt6.01□□□□□ -1.45
SSM4P40318 DSS4YPR017C 432 nt6.01□□□□□ -1.45
SSM4P40318 FRE7YOL152W 1863 nt6.01□□□□□ -1.45
SSM4P40318 ADD37YMR184W 597 nt6□□□□□ -1.45
SSM4P40318 SUI1YNL244C 327 nt6□□□□□ -1.45
SSM4P40318 VPS69YPR087W 321 nt6□□□□□ -1.45
SSM4P40318 YNR065CYNR065C 3351 nt6□□□□□ -1.45
SSM4P40318 RPG1YBR079C 2895 nt6□□□□□ -1.45
SSM4P40318 THI13YDL244W 1023 nt5.99□□□□□ -1.45
SSM4P40318 CAF16YFL028C 870 nt5.99□□□□□ -1.45
SSM4P40318 THI11YJR156C 1023 nt5.99□□□□□ -1.45
SSM4P40318 YML116W-AYML116W-A 303 nt5.99□□□□□ -1.45
SSM4P40318 MST1YKL194C 1389 nt5.99□□□□□ -1.45
SSM4P40318 MET7YOR241W 1647 nt5.99□□□□□ -1.45
SSM4P40318 PCS60YBR222C 1632 nt5.99□□□□□ -1.45
SSM4P40318 YER147C-AYER147C-A 411 nt5.99□□□□□ -1.45
Retrieved 100 of 7,029 protein–RNA pairs in 75 ms