Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RPS4Y1P22090 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4Y1P22090 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4Y1P22090 AC079630.1-202ENST00000618127 1840 ntBASIC20.78■□□□□ 0.92
RPS4Y1P22090 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4Y1P22090 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4Y1P22090 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4Y1P22090 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4Y1P22090 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4Y1P22090 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
RPS4Y1P22090 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RPS4Y1P22090 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RPS4Y1P22090 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4Y1P22090 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4Y1P22090 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4Y1P22090 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RPS4Y1P22090 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4Y1P22090 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.77■□□□□ 0.92
RPS4Y1P22090 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4Y1P22090 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.77■□□□□ 0.92
RPS4Y1P22090 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4Y1P22090 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4Y1P22090 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.77■□□□□ 0.92
RPS4Y1P22090 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.77■□□□□ 0.92
RPS4Y1P22090 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
RPS4Y1P22090 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RPS4Y1P22090 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RPS4Y1P22090 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.76■□□□□ 0.91
RPS4Y1P22090 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RPS4Y1P22090 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.76■□□□□ 0.91
RPS4Y1P22090 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4Y1P22090 RARRES2P1-201ENST00000474487 481 ntBASIC20.76■□□□□ 0.91
RPS4Y1P22090 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.76■□□□□ 0.91
RPS4Y1P22090 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.76■□□□□ 0.91
RPS4Y1P22090 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4Y1P22090 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RPS4Y1P22090 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y1P22090 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RPS4Y1P22090 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.75■□□□□ 0.91
RPS4Y1P22090 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y1P22090 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y1P22090 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y1P22090 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.75■□□□□ 0.91
RPS4Y1P22090 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RPS4Y1P22090 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.75■□□□□ 0.91
RPS4Y1P22090 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y1P22090 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y1P22090 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y1P22090 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y1P22090 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RPS4Y1P22090 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.74■□□□□ 0.91
RPS4Y1P22090 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y1P22090 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.74■□□□□ 0.91
RPS4Y1P22090 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RPS4Y1P22090 Z92544.1-202ENST00000571933 1220 ntBASIC20.74■□□□□ 0.91
RPS4Y1P22090 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y1P22090 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y1P22090 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y1P22090 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y1P22090 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y1P22090 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y1P22090 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y1P22090 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.73■□□□□ 0.91
RPS4Y1P22090 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
RPS4Y1P22090 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y1P22090 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y1P22090 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y1P22090 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y1P22090 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y1P22090 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y1P22090 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.73■□□□□ 0.91
RPS4Y1P22090 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4Y1P22090 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4Y1P22090 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4Y1P22090 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4Y1P22090 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RPS4Y1P22090 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS4Y1P22090 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS4Y1P22090 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4Y1P22090 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.72■□□□□ 0.91
RPS4Y1P22090 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RPS4Y1P22090 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4Y1P22090 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4Y1P22090 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RPS4Y1P22090 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.71■□□□□ 0.91
RPS4Y1P22090 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4Y1P22090 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RPS4Y1P22090 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4Y1P22090 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4Y1P22090 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.71■□□□□ 0.91
RPS4Y1P22090 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.71■□□□□ 0.91
RPS4Y1P22090 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.71■□□□□ 0.91
RPS4Y1P22090 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4Y1P22090 AC092028.1-203ENST00000608262 953 ntBASIC20.71■□□□□ 0.91
RPS4Y1P22090 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.71■□□□□ 0.91
RPS4Y1P22090 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.71■□□□□ 0.91
RPS4Y1P22090 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RPS4Y1P22090 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4Y1P22090 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.7■□□□□ 0.9
RPS4Y1P22090 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms