Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSF1P09603 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSF1P09603 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSF1P09603 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSF1P09603 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CSF1P09603 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSF1P09603 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSF1P09603 AL157400.5-201ENST00000507624 621 ntBASIC19.42■□□□□ 0.7
CSF1P09603 DUX4L18-201ENST00000553347 1267 ntBASIC19.42■□□□□ 0.7
CSF1P09603 AC133552.2-201ENST00000619106 1032 ntBASIC19.42■□□□□ 0.7
CSF1P09603 AC129492.7-201ENST00000622992 756 ntBASIC19.42■□□□□ 0.7
CSF1P09603 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
CSF1P09603 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSF1P09603 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSF1P09603 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSF1P09603 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CSF1P09603 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CSF1P09603 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.41■□□□□ 0.7
CSF1P09603 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSF1P09603 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.41■□□□□ 0.7
CSF1P09603 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.41■□□□□ 0.7
CSF1P09603 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CSF1P09603 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSF1P09603 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSF1P09603 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSF1P09603 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSF1P09603 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSF1P09603 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSF1P09603 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSF1P09603 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSF1P09603 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSF1P09603 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSF1P09603 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
CSF1P09603 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSF1P09603 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSF1P09603 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.4■□□□□ 0.7
CSF1P09603 AL592293.1-201ENST00000502889 1188 ntBASIC19.4■□□□□ 0.7
CSF1P09603 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.4■□□□□ 0.7
CSF1P09603 AC025884.2-201ENST00000553429 711 ntBASIC19.4■□□□□ 0.7
CSF1P09603 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSF1P09603 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CSF1P09603 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSF1P09603 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSF1P09603 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSF1P09603 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSF1P09603 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSF1P09603 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.4■□□□□ 0.7
CSF1P09603 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSF1P09603 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CSF1P09603 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CSF1P09603 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CSF1P09603 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CSF1P09603 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CSF1P09603 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CSF1P09603 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.39■□□□□ 0.69
CSF1P09603 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.39■□□□□ 0.69
CSF1P09603 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CSF1P09603 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.39■□□□□ 0.69
CSF1P09603 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSF1P09603 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSF1P09603 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.39■□□□□ 0.69
CSF1P09603 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.39■□□□□ 0.69
CSF1P09603 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CSF1P09603 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSF1P09603 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSF1P09603 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSF1P09603 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CSF1P09603 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSF1P09603 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.38■□□□□ 0.69
CSF1P09603 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSF1P09603 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSF1P09603 SMPD5-203ENST00000639008 1464 ntBASIC19.38■□□□□ 0.69
CSF1P09603 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSF1P09603 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CSF1P09603 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSF1P09603 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CSF1P09603 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.37■□□□□ 0.69
CSF1P09603 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CSF1P09603 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSF1P09603 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CSF1P09603 AC009831.1-201ENST00000580420 1582 ntBASIC19.37■□□□□ 0.69
CSF1P09603 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSF1P09603 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSF1P09603 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CSF1P09603 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CSF1P09603 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CSF1P09603 AC242852.2-201ENST00000615738 1807 ntBASIC19.37■□□□□ 0.69
CSF1P09603 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.37■□□□□ 0.69
CSF1P09603 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1P09603 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CSF1P09603 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1P09603 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1P09603 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1P09603 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
CSF1P09603 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CSF1P09603 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CSF1P09603 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.36■□□□□ 0.69
CSF1P09603 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1P09603 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1P09603 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms