Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SFTPBP07988 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SFTPBP07988 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SFTPBP07988 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SFTPBP07988 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SFTPBP07988 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SFTPBP07988 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SFTPBP07988 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SFTPBP07988 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SFTPBP07988 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.47■□□□□ 0.71
SFTPBP07988 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SFTPBP07988 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SFTPBP07988 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SFTPBP07988 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.47■□□□□ 0.71
SFTPBP07988 AL161729.1-201ENST00000604104 1402 ntBASIC19.47■□□□□ 0.71
SFTPBP07988 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SFTPBP07988 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.47■□□□□ 0.71
SFTPBP07988 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.47■□□□□ 0.71
SFTPBP07988 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SFTPBP07988 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SFTPBP07988 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SFTPBP07988 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.46■□□□□ 0.71
SFTPBP07988 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTPBP07988 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.46■□□□□ 0.71
SFTPBP07988 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.46■□□□□ 0.71
SFTPBP07988 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTPBP07988 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.46■□□□□ 0.71
SFTPBP07988 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SFTPBP07988 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTPBP07988 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTPBP07988 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.46■□□□□ 0.71
SFTPBP07988 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTPBP07988 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTPBP07988 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTPBP07988 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTPBP07988 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.7
SFTPBP07988 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.45■□□□□ 0.7
SFTPBP07988 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SFTPBP07988 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SFTPBP07988 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SFTPBP07988 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.45■□□□□ 0.7
SFTPBP07988 AC022616.5-201ENST00000518796 181 ntBASIC19.45■□□□□ 0.7
SFTPBP07988 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.45■□□□□ 0.7
SFTPBP07988 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
SFTPBP07988 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SFTPBP07988 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SFTPBP07988 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SFTPBP07988 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SFTPBP07988 C9orf163-202ENST00000624034 2573 ntBASIC19.44■□□□□ 0.7
SFTPBP07988 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SFTPBP07988 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SFTPBP07988 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SFTPBP07988 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SFTPBP07988 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SFTPBP07988 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.44■□□□□ 0.7
SFTPBP07988 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.44■□□□□ 0.7
SFTPBP07988 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SFTPBP07988 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SFTPBP07988 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SFTPBP07988 AL022069.1-201ENST00000568025 1636 ntBASIC19.43■□□□□ 0.7
SFTPBP07988 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.43■□□□□ 0.7
SFTPBP07988 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.43■□□□□ 0.7
SFTPBP07988 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
SFTPBP07988 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
SFTPBP07988 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SFTPBP07988 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SFTPBP07988 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SFTPBP07988 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.43■□□□□ 0.7
SFTPBP07988 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SFTPBP07988 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SFTPBP07988 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.43■□□□□ 0.7
SFTPBP07988 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SFTPBP07988 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFTPBP07988 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFTPBP07988 CLDN5-201ENST00000403084 2357 ntBASIC19.42■□□□□ 0.7
SFTPBP07988 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SFTPBP07988 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SFTPBP07988 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.42■□□□□ 0.7
SFTPBP07988 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.42■□□□□ 0.7
SFTPBP07988 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SFTPBP07988 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.42■□□□□ 0.7
SFTPBP07988 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFTPBP07988 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFTPBP07988 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SFTPBP07988 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFTPBP07988 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFTPBP07988 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SFTPBP07988 AC131274.2-201ENST00000580697 1507 ntBASIC19.41■□□□□ 0.7
SFTPBP07988 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.41■□□□□ 0.7
SFTPBP07988 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SFTPBP07988 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.41■□□□□ 0.7
SFTPBP07988 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SFTPBP07988 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SFTPBP07988 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SFTPBP07988 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SFTPBP07988 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SFTPBP07988 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SFTPBP07988 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SFTPBP07988 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SFTPBP07988 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms