Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.79■□□□□ 0.76
UPK1BO75841 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1BO75841 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1BO75841 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1BO75841 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1BO75841 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
UPK1BO75841 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1BO75841 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1BO75841 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1BO75841 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1BO75841 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1BO75841 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.78■□□□□ 0.76
UPK1BO75841 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1BO75841 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1BO75841 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
UPK1BO75841 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1BO75841 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.77■□□□□ 0.76
UPK1BO75841 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK1BO75841 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK1BO75841 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK1BO75841 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
UPK1BO75841 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPK1BO75841 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
UPK1BO75841 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
UPK1BO75841 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK1BO75841 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK1BO75841 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
UPK1BO75841 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPK1BO75841 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK1BO75841 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.76■□□□□ 0.75
UPK1BO75841 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPK1BO75841 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.76■□□□□ 0.75
UPK1BO75841 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK1BO75841 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
UPK1BO75841 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
UPK1BO75841 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
UPK1BO75841 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1BO75841 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
UPK1BO75841 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1BO75841 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.75■□□□□ 0.75
UPK1BO75841 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.75■□□□□ 0.75
UPK1BO75841 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
UPK1BO75841 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.75■□□□□ 0.75
UPK1BO75841 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1BO75841 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.75■□□□□ 0.75
UPK1BO75841 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1BO75841 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1BO75841 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1BO75841 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1BO75841 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1BO75841 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1BO75841 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.74■□□□□ 0.75
UPK1BO75841 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
UPK1BO75841 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.74■□□□□ 0.75
UPK1BO75841 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1BO75841 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1BO75841 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1BO75841 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1BO75841 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.73■□□□□ 0.75
UPK1BO75841 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1BO75841 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
UPK1BO75841 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UPK1BO75841 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1BO75841 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
UPK1BO75841 RARRES2P7-201ENST00000567349 469 ntBASIC19.73■□□□□ 0.75
UPK1BO75841 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
UPK1BO75841 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1BO75841 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1BO75841 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UPK1BO75841 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1BO75841 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.73■□□□□ 0.75
UPK1BO75841 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1BO75841 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1BO75841 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.72■□□□□ 0.75
UPK1BO75841 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1BO75841 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1BO75841 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.72■□□□□ 0.75
UPK1BO75841 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
UPK1BO75841 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1BO75841 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
UPK1BO75841 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
UPK1BO75841 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
UPK1BO75841 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
UPK1BO75841 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.72■□□□□ 0.75
UPK1BO75841 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.71■□□□□ 0.75
UPK1BO75841 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK1BO75841 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK1BO75841 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
UPK1BO75841 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPK1BO75841 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK1BO75841 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK1BO75841 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK1BO75841 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
UPK1BO75841 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPK1BO75841 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK1BO75841 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1BO75841 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1BO75841 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1BO75841 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1BO75841 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms