Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 AC009086.3-201ENST00000623486 1008 ntBASIC24.69■■□□□ 1.54
TSPAN1O60635 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
TSPAN1O60635 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.69■■□□□ 1.54
TSPAN1O60635 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TSPAN1O60635 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TSPAN1O60635 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TSPAN1O60635 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TSPAN1O60635 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TSPAN1O60635 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.68■■□□□ 1.54
TSPAN1O60635 AC142381.2-201ENST00000566120 298 ntBASIC24.68■■□□□ 1.54
TSPAN1O60635 MIR4767-201ENST00000582827 78 ntBASIC24.68■■□□□ 1.54
TSPAN1O60635 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TSPAN1O60635 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TSPAN1O60635 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
TSPAN1O60635 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TSPAN1O60635 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TSPAN1O60635 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.67■■□□□ 1.54
TSPAN1O60635 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TSPAN1O60635 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.67■■□□□ 1.54
TSPAN1O60635 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TSPAN1O60635 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.67■■□□□ 1.54
TSPAN1O60635 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.67■■□□□ 1.54
TSPAN1O60635 AL138724.1-201ENST00000606771 1088 ntBASIC24.67■■□□□ 1.54
TSPAN1O60635 AL355001.2-201ENST00000620617 1191 ntBASIC24.67■■□□□ 1.54
TSPAN1O60635 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TSPAN1O60635 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.67■■□□□ 1.54
TSPAN1O60635 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN1O60635 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN1O60635 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN1O60635 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN1O60635 AC011298.3-201ENST00000615796 283 ntBASIC24.66■■□□□ 1.54
TSPAN1O60635 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.66■■□□□ 1.54
TSPAN1O60635 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN1O60635 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.65■■□□□ 1.54
TSPAN1O60635 AC004812.2-201ENST00000611079 2094 ntBASIC24.65■■□□□ 1.54
TSPAN1O60635 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TSPAN1O60635 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TSPAN1O60635 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
TSPAN1O60635 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
TSPAN1O60635 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TSPAN1O60635 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.65■■□□□ 1.54
TSPAN1O60635 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TSPAN1O60635 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
TSPAN1O60635 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TSPAN1O60635 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.64■■□□□ 1.54
TSPAN1O60635 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.64■■□□□ 1.54
TSPAN1O60635 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.64■■□□□ 1.54
TSPAN1O60635 MIR3181-201ENST00000578512 73 ntBASIC24.64■■□□□ 1.54
TSPAN1O60635 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.64■■□□□ 1.54
TSPAN1O60635 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.64■■□□□ 1.53
TSPAN1O60635 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
TSPAN1O60635 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TSPAN1O60635 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TSPAN1O60635 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TSPAN1O60635 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TSPAN1O60635 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.63■■□□□ 1.53
TSPAN1O60635 AP001330.3-201ENST00000520123 633 ntBASIC24.63■■□□□ 1.53
TSPAN1O60635 AF213884.3-201ENST00000563833 479 ntBASIC24.63■■□□□ 1.53
TSPAN1O60635 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.63■■□□□ 1.53
TSPAN1O60635 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.63■■□□□ 1.53
TSPAN1O60635 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.63■■□□□ 1.53
TSPAN1O60635 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TSPAN1O60635 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TSPAN1O60635 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN1O60635 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
TSPAN1O60635 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN1O60635 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
TSPAN1O60635 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN1O60635 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN1O60635 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.62■■□□□ 1.53
TSPAN1O60635 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.62■■□□□ 1.53
TSPAN1O60635 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.62■■□□□ 1.53
TSPAN1O60635 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.62■■□□□ 1.53
TSPAN1O60635 AL136967.2-201ENST00000623968 743 ntBASIC24.62■■□□□ 1.53
TSPAN1O60635 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN1O60635 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN1O60635 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
TSPAN1O60635 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TSPAN1O60635 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.61■■□□□ 1.53
TSPAN1O60635 MIR939-201ENST00000401314 82 ntBASIC24.61■■□□□ 1.53
TSPAN1O60635 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TSPAN1O60635 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.61■■□□□ 1.53
TSPAN1O60635 AC136469.2-201ENST00000623944 1028 ntBASIC24.61■■□□□ 1.53
TSPAN1O60635 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TSPAN1O60635 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
TSPAN1O60635 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
TSPAN1O60635 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TSPAN1O60635 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TSPAN1O60635 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
TSPAN1O60635 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TSPAN1O60635 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TSPAN1O60635 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TSPAN1O60635 MIR935-201ENST00000401179 91 ntBASIC24.6■■□□□ 1.53
TSPAN1O60635 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
TSPAN1O60635 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
TSPAN1O60635 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.6■■□□□ 1.53
TSPAN1O60635 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.6■■□□□ 1.53
TSPAN1O60635 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TSPAN1O60635 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TSPAN1O60635 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms