Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-5A0A0J9YX44 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-5A0A0J9YX44 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-5A0A0J9YX44 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV5-5A0A0J9YX44 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV5-5A0A0J9YX44 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-5A0A0J9YX44 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRBV5-5A0A0J9YX44 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-5A0A0J9YX44 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.66■□□□□ 0.74
TRBV5-5A0A0J9YX44 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-5A0A0J9YX44 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRBV5-5A0A0J9YX44 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.66■□□□□ 0.74
TRBV5-5A0A0J9YX44 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRBV5-5A0A0J9YX44 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-5A0A0J9YX44 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-5A0A0J9YX44 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-5A0A0J9YX44 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-5A0A0J9YX44 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-5A0A0J9YX44 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-5A0A0J9YX44 AC242852.2-201ENST00000615738 1807 ntBASIC19.65■□□□□ 0.74
TRBV5-5A0A0J9YX44 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-5A0A0J9YX44 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.65■□□□□ 0.74
TRBV5-5A0A0J9YX44 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-5A0A0J9YX44 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-5A0A0J9YX44 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-5A0A0J9YX44 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-5A0A0J9YX44 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRBV5-5A0A0J9YX44 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
TRBV5-5A0A0J9YX44 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRBV5-5A0A0J9YX44 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRBV5-5A0A0J9YX44 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-5A0A0J9YX44 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.64■□□□□ 0.73
TRBV5-5A0A0J9YX44 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-5A0A0J9YX44 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-5A0A0J9YX44 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-5A0A0J9YX44 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-5A0A0J9YX44 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.64■□□□□ 0.73
TRBV5-5A0A0J9YX44 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRBV5-5A0A0J9YX44 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV5-5A0A0J9YX44 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.63■□□□□ 0.73
TRBV5-5A0A0J9YX44 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV5-5A0A0J9YX44 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.63■□□□□ 0.73
TRBV5-5A0A0J9YX44 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV5-5A0A0J9YX44 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV5-5A0A0J9YX44 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.63■□□□□ 0.73
TRBV5-5A0A0J9YX44 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.63■□□□□ 0.73
TRBV5-5A0A0J9YX44 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV5-5A0A0J9YX44 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV5-5A0A0J9YX44 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV5-5A0A0J9YX44 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV5-5A0A0J9YX44 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV5-5A0A0J9YX44 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV5-5A0A0J9YX44 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.62■□□□□ 0.73
TRBV5-5A0A0J9YX44 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV5-5A0A0J9YX44 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV5-5A0A0J9YX44 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV5-5A0A0J9YX44 AC079630.1-202ENST00000618127 1840 ntBASIC19.62■□□□□ 0.73
TRBV5-5A0A0J9YX44 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRBV5-5A0A0J9YX44 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBV5-5A0A0J9YX44 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-5A0A0J9YX44 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-5A0A0J9YX44 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-5A0A0J9YX44 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-5A0A0J9YX44 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-5A0A0J9YX44 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.59■□□□□ 0.73
TRBV5-5A0A0J9YX44 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV5-5A0A0J9YX44 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBV5-5A0A0J9YX44 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBV5-5A0A0J9YX44 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-5A0A0J9YX44 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRBV5-5A0A0J9YX44 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms