Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SPG7Q9UQ90 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SPG7Q9UQ90 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SPG7Q9UQ90 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC29.93■■■□□ 2.38
SPG7Q9UQ90 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
SPG7Q9UQ90 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.93■■■□□ 2.38
SPG7Q9UQ90 MPST-208ENST00000628507 698 ntTSL 5 BASIC29.93■■■□□ 2.38
SPG7Q9UQ90 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SPG7Q9UQ90 USF2-207ENST00000595068 1612 ntTSL 5 BASIC29.93■■■□□ 2.38
SPG7Q9UQ90 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SPG7Q9UQ90 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC29.92■■■□□ 2.38
SPG7Q9UQ90 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC29.92■■■□□ 2.38
SPG7Q9UQ90 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC29.92■■■□□ 2.38
SPG7Q9UQ90 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
SPG7Q9UQ90 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.91■■■□□ 2.38
SPG7Q9UQ90 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SPG7Q9UQ90 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
SPG7Q9UQ90 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SPG7Q9UQ90 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SPG7Q9UQ90 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC29.9■■■□□ 2.38
SPG7Q9UQ90 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SPG7Q9UQ90 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC29.9■■■□□ 2.38
SPG7Q9UQ90 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
SPG7Q9UQ90 JTB-203ENST00000368589 1216 ntTSL 2 BASIC29.9■■■□□ 2.38
SPG7Q9UQ90 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC29.9■■■□□ 2.38
SPG7Q9UQ90 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SPG7Q9UQ90 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SPG7Q9UQ90 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
SPG7Q9UQ90 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
SPG7Q9UQ90 AL162430.1-201ENST00000480705 870 ntBASIC29.88■■■□□ 2.37
SPG7Q9UQ90 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SPG7Q9UQ90 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SPG7Q9UQ90 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SPG7Q9UQ90 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC29.87■■■□□ 2.37
SPG7Q9UQ90 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
SPG7Q9UQ90 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SPG7Q9UQ90 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.87■■■□□ 2.37
SPG7Q9UQ90 ALDH1A3-203ENST00000557963 1670 ntBASIC29.87■■■□□ 2.37
SPG7Q9UQ90 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SPG7Q9UQ90 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SPG7Q9UQ90 SNX3-202ENST00000349379 890 ntTSL 2 BASIC29.86■■■□□ 2.37
SPG7Q9UQ90 GRAMD4P2-201ENST00000423297 1097 ntBASIC29.86■■■□□ 2.37
SPG7Q9UQ90 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC29.86■■■□□ 2.37
SPG7Q9UQ90 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC29.85■■■□□ 2.37
SPG7Q9UQ90 pRNA.6-201ENST00000610482 90 ntBASIC29.85■■■□□ 2.37
SPG7Q9UQ90 pRNA.5-201ENST00000612139 90 ntBASIC29.85■■■□□ 2.37
SPG7Q9UQ90 pRNA.11-201ENST00000618423 90 ntBASIC29.85■■■□□ 2.37
SPG7Q9UQ90 pRNA.13-201ENST00000619112 90 ntBASIC29.85■■■□□ 2.37
SPG7Q9UQ90 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
SPG7Q9UQ90 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
SPG7Q9UQ90 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC29.84■■■□□ 2.37
SPG7Q9UQ90 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC29.84■■■□□ 2.37
SPG7Q9UQ90 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29.84■■■□□ 2.37
SPG7Q9UQ90 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
SPG7Q9UQ90 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SPG7Q9UQ90 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SPG7Q9UQ90 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SPG7Q9UQ90 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC29.83■■■□□ 2.37
SPG7Q9UQ90 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SPG7Q9UQ90 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
SPG7Q9UQ90 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SPG7Q9UQ90 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SPG7Q9UQ90 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
SPG7Q9UQ90 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC29.82■■■□□ 2.36
SPG7Q9UQ90 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC29.82■■■□□ 2.36
SPG7Q9UQ90 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC29.82■■■□□ 2.36
SPG7Q9UQ90 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
SPG7Q9UQ90 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC29.81■■■□□ 2.36
SPG7Q9UQ90 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SPG7Q9UQ90 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SPG7Q9UQ90 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC29.81■■■□□ 2.36
SPG7Q9UQ90 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
SPG7Q9UQ90 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SPG7Q9UQ90 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SPG7Q9UQ90 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC29.8■■■□□ 2.36
SPG7Q9UQ90 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC29.8■■■□□ 2.36
SPG7Q9UQ90 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC29.8■■■□□ 2.36
SPG7Q9UQ90 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
SPG7Q9UQ90 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
SPG7Q9UQ90 AC141586.4-201ENST00000624558 1573 ntBASIC29.8■■■□□ 2.36
SPG7Q9UQ90 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
SPG7Q9UQ90 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC29.79■■■□□ 2.36
SPG7Q9UQ90 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SPG7Q9UQ90 GLI3-203ENST00000437480 451 ntTSL 2 BASIC29.79■■■□□ 2.36
SPG7Q9UQ90 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SPG7Q9UQ90 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SPG7Q9UQ90 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC29.79■■■□□ 2.36
SPG7Q9UQ90 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC29.78■■■□□ 2.36
SPG7Q9UQ90 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SPG7Q9UQ90 AK1-201ENST00000223836 736 ntTSL 3 BASIC29.78■■■□□ 2.36
SPG7Q9UQ90 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SPG7Q9UQ90 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
SPG7Q9UQ90 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC29.78■■■□□ 2.36
SPG7Q9UQ90 AC126544.1-201ENST00000580842 1059 ntBASIC29.78■■■□□ 2.36
SPG7Q9UQ90 SP2-202ENST00000613139 908 ntTSL 5 BASIC29.78■■■□□ 2.36
SPG7Q9UQ90 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.78■■■□□ 2.36
SPG7Q9UQ90 EI24-204ENST00000527235 1625 ntTSL 5 BASIC29.78■■■□□ 2.36
SPG7Q9UQ90 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SPG7Q9UQ90 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SPG7Q9UQ90 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms