Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTSFQ9UBX1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTSFQ9UBX1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTSFQ9UBX1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTSFQ9UBX1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTSFQ9UBX1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.38■■□□□ 1.01
CTSFQ9UBX1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.38■■□□□ 1.01
CTSFQ9UBX1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTSFQ9UBX1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTSFQ9UBX1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.38■■□□□ 1.01
CTSFQ9UBX1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTSFQ9UBX1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTSFQ9UBX1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTSFQ9UBX1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTSFQ9UBX1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTSFQ9UBX1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.37■■□□□ 1.01
CTSFQ9UBX1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CTSFQ9UBX1 PBX2P1-201ENST00000493219 1291 ntBASIC21.37■■□□□ 1.01
CTSFQ9UBX1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CTSFQ9UBX1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.37■■□□□ 1.01
CTSFQ9UBX1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTSFQ9UBX1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTSFQ9UBX1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CTSFQ9UBX1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTSFQ9UBX1 C17orf82-201ENST00000623772 1530 ntBASIC21.36■■□□□ 1.01
CTSFQ9UBX1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.36■■□□□ 1.01
CTSFQ9UBX1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.36■■□□□ 1.01
CTSFQ9UBX1 AL136162.1-201ENST00000607711 1078 ntBASIC21.36■■□□□ 1.01
CTSFQ9UBX1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.36■■□□□ 1.01
CTSFQ9UBX1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.36■■□□□ 1.01
CTSFQ9UBX1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CTSFQ9UBX1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.36■■□□□ 1.01
CTSFQ9UBX1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
CTSFQ9UBX1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.36■■□□□ 1.01
CTSFQ9UBX1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTSFQ9UBX1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTSFQ9UBX1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTSFQ9UBX1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTSFQ9UBX1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.35■■□□□ 1.01
CTSFQ9UBX1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.35■■□□□ 1.01
CTSFQ9UBX1 AC099791.2-201ENST00000605725 427 ntBASIC21.35■■□□□ 1.01
CTSFQ9UBX1 AC106739.1-201ENST00000617035 715 ntBASIC21.35■■□□□ 1.01
CTSFQ9UBX1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.35■■□□□ 1.01
CTSFQ9UBX1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTSFQ9UBX1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTSFQ9UBX1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTSFQ9UBX1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.35■■□□□ 1.01
CTSFQ9UBX1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CTSFQ9UBX1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTSFQ9UBX1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTSFQ9UBX1 LINC01124-201ENST00000409786 2117 ntBASIC21.34■■□□□ 1.01
CTSFQ9UBX1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CTSFQ9UBX1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTSFQ9UBX1 AC005837.3-201ENST00000612163 286 ntBASIC21.34■■□□□ 1.01
CTSFQ9UBX1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.34■■□□□ 1.01
CTSFQ9UBX1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CTSFQ9UBX1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTSFQ9UBX1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTSFQ9UBX1 AC135279.3-201ENST00000610945 1311 ntBASIC21.33■■□□□ 1.01
CTSFQ9UBX1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.33■■□□□ 1.01
CTSFQ9UBX1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTSFQ9UBX1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTSFQ9UBX1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CTSFQ9UBX1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTSFQ9UBX1 AC024257.2-201ENST00000549699 147 ntBASIC21.33■■□□□ 1.01
CTSFQ9UBX1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.33■■□□□ 1
CTSFQ9UBX1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.33■■□□□ 1
CTSFQ9UBX1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CTSFQ9UBX1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CTSFQ9UBX1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.32■■□□□ 1
CTSFQ9UBX1 AC133561.4-201ENST00000566112 224 ntBASIC21.32■■□□□ 1
CTSFQ9UBX1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.32■■□□□ 1
CTSFQ9UBX1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.32■■□□□ 1
CTSFQ9UBX1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.32■■□□□ 1
CTSFQ9UBX1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTSFQ9UBX1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.31■■□□□ 1
CTSFQ9UBX1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.31■■□□□ 1
CTSFQ9UBX1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.31■■□□□ 1
CTSFQ9UBX1 AL139125.2-201ENST00000623134 1869 ntBASIC21.31■■□□□ 1
CTSFQ9UBX1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.31■■□□□ 1
CTSFQ9UBX1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CTSFQ9UBX1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.31■■□□□ 1
CTSFQ9UBX1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CTSFQ9UBX1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.31■■□□□ 1
CTSFQ9UBX1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CTSFQ9UBX1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.31■■□□□ 1
CTSFQ9UBX1 SYT6-210ENST00000641643 1587 ntBASIC21.31■■□□□ 1
CTSFQ9UBX1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CTSFQ9UBX1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.3■■□□□ 1
CTSFQ9UBX1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.3■■□□□ 1
CTSFQ9UBX1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.3■■□□□ 1
CTSFQ9UBX1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CTSFQ9UBX1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.3■■□□□ 1
CTSFQ9UBX1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.3■■□□□ 1
CTSFQ9UBX1 DUX4L19-201ENST00000557448 1267 ntBASIC21.3■■□□□ 1
CTSFQ9UBX1 AC092171.4-201ENST00000609130 632 ntBASIC21.3■■□□□ 1
CTSFQ9UBX1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.3■■□□□ 1
CTSFQ9UBX1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.3■■□□□ 1
CTSFQ9UBX1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.3■■□□□ 1
CTSFQ9UBX1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms