Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC71LQ8N9Z2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC71LQ8N9Z2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CCDC71LQ8N9Z2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCDC71LQ8N9Z2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC71LQ8N9Z2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC71LQ8N9Z2 GUSBP5-202ENST00000510805 1989 ntBASIC18.83■□□□□ 0.61
CCDC71LQ8N9Z2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC71LQ8N9Z2 AC026202.3-201ENST00000600805 1127 ntBASIC18.83■□□□□ 0.6
CCDC71LQ8N9Z2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC71LQ8N9Z2 LINC00526-201ENST00000581067 1875 ntBASIC18.83■□□□□ 0.6
CCDC71LQ8N9Z2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CCDC71LQ8N9Z2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC71LQ8N9Z2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC71LQ8N9Z2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC71LQ8N9Z2 LINC00565-201ENST00000562710 2331 ntBASIC18.83■□□□□ 0.6
CCDC71LQ8N9Z2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC71LQ8N9Z2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC71LQ8N9Z2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC71LQ8N9Z2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71LQ8N9Z2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC71LQ8N9Z2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
CCDC71LQ8N9Z2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71LQ8N9Z2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71LQ8N9Z2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71LQ8N9Z2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71LQ8N9Z2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71LQ8N9Z2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71LQ8N9Z2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 ECEL1P1-201ENST00000373592 1742 ntBASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71LQ8N9Z2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71LQ8N9Z2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71LQ8N9Z2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71LQ8N9Z2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71LQ8N9Z2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71LQ8N9Z2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC71LQ8N9Z2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC71LQ8N9Z2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.78■□□□□ 0.6
CCDC71LQ8N9Z2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
CCDC71LQ8N9Z2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.78■□□□□ 0.6
CCDC71LQ8N9Z2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71LQ8N9Z2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71LQ8N9Z2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CCDC71LQ8N9Z2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC71LQ8N9Z2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71LQ8N9Z2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC71LQ8N9Z2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CCDC71LQ8N9Z2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC71LQ8N9Z2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC71LQ8N9Z2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC71LQ8N9Z2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC71LQ8N9Z2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC71LQ8N9Z2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms