Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.87■□□□□ 0.45
TTC9CQ8N5M4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC9CQ8N5M4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC9CQ8N5M4 KRT125P-201ENST00000546827 989 ntBASIC17.87■□□□□ 0.45
TTC9CQ8N5M4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TTC9CQ8N5M4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TTC9CQ8N5M4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.87■□□□□ 0.45
TTC9CQ8N5M4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC9CQ8N5M4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC9CQ8N5M4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TTC9CQ8N5M4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC9CQ8N5M4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TTC9CQ8N5M4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC9CQ8N5M4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TTC9CQ8N5M4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC9CQ8N5M4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TTC9CQ8N5M4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC9CQ8N5M4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC9CQ8N5M4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.85■□□□□ 0.45
TTC9CQ8N5M4 MIR6722-201ENST00000617286 78 ntBASIC17.85■□□□□ 0.45
TTC9CQ8N5M4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.85■□□□□ 0.45
TTC9CQ8N5M4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.85■□□□□ 0.45
TTC9CQ8N5M4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC9CQ8N5M4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 DUSP8P5-201ENST00000422884 1815 ntBASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TTC9CQ8N5M4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.83■□□□□ 0.45
TTC9CQ8N5M4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TTC9CQ8N5M4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.83■□□□□ 0.45
TTC9CQ8N5M4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
TTC9CQ8N5M4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TTC9CQ8N5M4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TTC9CQ8N5M4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TTC9CQ8N5M4 AC009299.2-201ENST00000482477 511 ntBASIC17.83■□□□□ 0.44
TTC9CQ8N5M4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TTC9CQ8N5M4 AL451085.2-201ENST00000605085 799 ntBASIC17.83■□□□□ 0.44
TTC9CQ8N5M4 AC092028.1-203ENST00000608262 953 ntBASIC17.83■□□□□ 0.44
TTC9CQ8N5M4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
TTC9CQ8N5M4 ANOS2P-203ENST00000472227 1816 ntBASIC17.83■□□□□ 0.44
TTC9CQ8N5M4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.83■□□□□ 0.44
TTC9CQ8N5M4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TTC9CQ8N5M4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC9CQ8N5M4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TTC9CQ8N5M4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC9CQ8N5M4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.82■□□□□ 0.44
TTC9CQ8N5M4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC9CQ8N5M4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.82■□□□□ 0.44
TTC9CQ8N5M4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.82■□□□□ 0.44
TTC9CQ8N5M4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TTC9CQ8N5M4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC9CQ8N5M4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC9CQ8N5M4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.82■□□□□ 0.44
TTC9CQ8N5M4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TTC9CQ8N5M4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.82■□□□□ 0.44
TTC9CQ8N5M4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 AC092068.2-201ENST00000590491 1708 ntBASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms