Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNX30Q5VWJ9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNX30Q5VWJ9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SNX30Q5VWJ9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNX30Q5VWJ9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
SNX30Q5VWJ9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SNX30Q5VWJ9 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.84■■□□□ 1.41
SNX30Q5VWJ9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SNX30Q5VWJ9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
SNX30Q5VWJ9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.83■■□□□ 1.41
SNX30Q5VWJ9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.83■■□□□ 1.41
SNX30Q5VWJ9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SNX30Q5VWJ9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.83■■□□□ 1.41
SNX30Q5VWJ9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.83■■□□□ 1.41
SNX30Q5VWJ9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SNX30Q5VWJ9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SNX30Q5VWJ9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SNX30Q5VWJ9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SNX30Q5VWJ9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SNX30Q5VWJ9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SNX30Q5VWJ9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SNX30Q5VWJ9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 AC133561.1-201ENST00000568600 2415 ntBASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 AC110285.6-201ENST00000617652 491 ntBASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SNX30Q5VWJ9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNX30Q5VWJ9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SNX30Q5VWJ9 SRD5A1P1-201ENST00000442297 786 ntBASIC23.81■■□□□ 1.4
SNX30Q5VWJ9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SNX30Q5VWJ9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SNX30Q5VWJ9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNX30Q5VWJ9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SNX30Q5VWJ9 ALDH1A3-203ENST00000557963 1670 ntBASIC23.8■■□□□ 1.4
SNX30Q5VWJ9 MIR638-201ENST00000385237 100 ntBASIC23.8■■□□□ 1.4
SNX30Q5VWJ9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNX30Q5VWJ9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
SNX30Q5VWJ9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
SNX30Q5VWJ9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNX30Q5VWJ9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.8■■□□□ 1.4
SNX30Q5VWJ9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SNX30Q5VWJ9 AC096631.2-201ENST00000436136 790 ntBASIC23.79■■□□□ 1.4
SNX30Q5VWJ9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.79■■□□□ 1.4
SNX30Q5VWJ9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.79■■□□□ 1.4
SNX30Q5VWJ9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.79■■□□□ 1.4
SNX30Q5VWJ9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNX30Q5VWJ9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNX30Q5VWJ9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNX30Q5VWJ9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNX30Q5VWJ9 AC009102.2-201ENST00000606772 1639 ntBASIC23.78■■□□□ 1.4
SNX30Q5VWJ9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SNX30Q5VWJ9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SNX30Q5VWJ9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SNX30Q5VWJ9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SNX30Q5VWJ9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNX30Q5VWJ9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 AC133561.4-201ENST00000566112 224 ntBASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 AC019069.1-201ENST00000610008 1333 ntBASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX30Q5VWJ9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.76■■□□□ 1.39
SNX30Q5VWJ9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.76■■□□□ 1.39
SNX30Q5VWJ9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX30Q5VWJ9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SNX30Q5VWJ9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SNX30Q5VWJ9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SNX30Q5VWJ9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNX30Q5VWJ9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.75■■□□□ 1.39
SNX30Q5VWJ9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SNX30Q5VWJ9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms