Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 DUX4L24-201ENST00000617576 1269 ntBASIC19.47■□□□□ 0.71
AP3S2P59780 DUX4L22-201ENST00000618238 1269 ntBASIC19.47■□□□□ 0.71
AP3S2P59780 DUX4L20-201ENST00000619712 1269 ntBASIC19.47■□□□□ 0.71
AP3S2P59780 DUX4L21-201ENST00000622058 1269 ntBASIC19.47■□□□□ 0.71
AP3S2P59780 DUX4L10-201ENST00000622460 1267 ntBASIC19.47■□□□□ 0.71
AP3S2P59780 DUX4L25-201ENST00000624915 1269 ntBASIC19.47■□□□□ 0.71
AP3S2P59780 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3S2P59780 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3S2P59780 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3S2P59780 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
AP3S2P59780 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.46■□□□□ 0.71
AP3S2P59780 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3S2P59780 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
AP3S2P59780 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.46■□□□□ 0.71
AP3S2P59780 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3S2P59780 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3S2P59780 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.46■□□□□ 0.71
AP3S2P59780 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP3S2P59780 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
AP3S2P59780 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3S2P59780 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.46■□□□□ 0.71
AP3S2P59780 LINC01971-201ENST00000617888 1048 ntBASIC19.46■□□□□ 0.71
AP3S2P59780 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3S2P59780 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.46■□□□□ 0.71
AP3S2P59780 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3S2P59780 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP3S2P59780 ESRRAP2-201ENST00000418437 1549 ntBASIC19.46■□□□□ 0.71
AP3S2P59780 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3S2P59780 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3S2P59780 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
AP3S2P59780 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.45■□□□□ 0.7
AP3S2P59780 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3S2P59780 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3S2P59780 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3S2P59780 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3S2P59780 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3S2P59780 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
AP3S2P59780 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3S2P59780 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3S2P59780 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3S2P59780 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP3S2P59780 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
AP3S2P59780 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.44■□□□□ 0.7
AP3S2P59780 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3S2P59780 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
AP3S2P59780 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.44■□□□□ 0.7
AP3S2P59780 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
AP3S2P59780 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP3S2P59780 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3S2P59780 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
AP3S2P59780 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
AP3S2P59780 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
AP3S2P59780 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
AP3S2P59780 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP3S2P59780 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP3S2P59780 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.42■□□□□ 0.7
AP3S2P59780 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP3S2P59780 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP3S2P59780 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.42■□□□□ 0.7
AP3S2P59780 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP3S2P59780 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
AP3S2P59780 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP3S2P59780 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S2P59780 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S2P59780 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S2P59780 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S2P59780 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S2P59780 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S2P59780 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.41■□□□□ 0.7
AP3S2P59780 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.41■□□□□ 0.7
AP3S2P59780 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.41■□□□□ 0.7
AP3S2P59780 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
AP3S2P59780 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S2P59780 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
AP3S2P59780 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S2P59780 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
AP3S2P59780 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S2P59780 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
AP3S2P59780 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S2P59780 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S2P59780 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
AP3S2P59780 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S2P59780 HLA-V-202ENST00000446817 847 ntBASIC19.4■□□□□ 0.7
AP3S2P59780 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
AP3S2P59780 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S2P59780 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S2P59780 AL161729.1-201ENST00000604104 1402 ntBASIC19.4■□□□□ 0.7
AP3S2P59780 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S2P59780 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S2P59780 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S2P59780 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.4■□□□□ 0.7
AP3S2P59780 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.4■□□□□ 0.7
AP3S2P59780 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.39■□□□□ 0.7
AP3S2P59780 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
AP3S2P59780 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
AP3S2P59780 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
AP3S2P59780 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
AP3S2P59780 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3S2P59780 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.39■□□□□ 0.69
AP3S2P59780 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms