Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 ALG1YBR110W 1350 nt6.3□□□□□ -1.4
MSH3P25336 SMF2YHR050W 1650 nt6.3□□□□□ -1.4
MSH3P25336 YGL072CYGL072C 360 nt6.29□□□□□ -1.4
MSH3P25336 RPT1YKL145W 1404 nt6.29□□□□□ -1.4
MSH3P25336 GPN3YLR243W 819 nt6.29□□□□□ -1.4
MSH3P25336 SPC2YML055W 537 nt6.29□□□□□ -1.4
MSH3P25336 RPS10BYMR230W 318 nt6.29□□□□□ -1.4
MSH3P25336 RBD2YPL246C 789 nt6.29□□□□□ -1.4
MSH3P25336 CPR1YDR155C 489 nt6.28□□□□□ -1.4
MSH3P25336 YFL041W-AYFL041W-A 192 nt6.28□□□□□ -1.4
MSH3P25336 YJL156W-AYJL156W-A 222 nt6.28□□□□□ -1.4
MSH3P25336 CMC1YKL137W 336 nt6.28□□□□□ -1.4
MSH3P25336 IRC25YLR021W 540 nt6.28□□□□□ -1.4
MSH3P25336 YLR042CYLR042C 486 nt6.28□□□□□ -1.4
MSH3P25336 YML012C-AYML012C-A 378 nt6.28□□□□□ -1.4
MSH3P25336 ADD37YMR184W 597 nt6.28□□□□□ -1.4
MSH3P25336 PFA3YNL326C 1011 nt6.28□□□□□ -1.4
MSH3P25336 LOA1YPR139C 903 nt6.28□□□□□ -1.4
MSH3P25336 SUE1YPR151C 621 nt6.28□□□□□ -1.4
MSH3P25336 STB3YDR169C 1542 nt6.28□□□□□ -1.4
MSH3P25336 PWP1YLR196W 1731 nt6.28□□□□□ -1.4
MSH3P25336 GYP1YOR070C 1914 nt6.27□□□□□ -1.41
MSH3P25336 HEM3YDL205C 984 nt6.27□□□□□ -1.41
MSH3P25336 PLP1YDR183W 693 nt6.27□□□□□ -1.41
MSH3P25336 RPB4YJL140W 666 nt6.27□□□□□ -1.41
MSH3P25336 YKL071WYKL071W 771 nt6.27□□□□□ -1.41
MSH3P25336 YKR073CYKR073C 321 nt6.27□□□□□ -1.41
MSH3P25336 YLR407WYLR407W 687 nt6.27□□□□□ -1.41
MSH3P25336 ROT1YMR200W 771 nt6.27□□□□□ -1.41
MSH3P25336 ATG14YBR128C 1035 nt6.27□□□□□ -1.41
MSH3P25336 LDB17YDL146W 1476 nt6.27□□□□□ -1.41
MSH3P25336 VNX1YNL321W 2727 nt6.27□□□□□ -1.41
MSH3P25336 SSK1YLR006C 2139 nt6.26□□□□□ -1.41
MSH3P25336 VCX1YDL128W 1236 nt6.26□□□□□ -1.41
MSH3P25336 YER010CYER010C 705 nt6.26□□□□□ -1.41
MSH3P25336 SNZ3YFL059W 897 nt6.26□□□□□ -1.41
MSH3P25336 YGR219WYGR219W 342 nt6.26□□□□□ -1.41
MSH3P25336 CBF1YJR060W 1056 nt6.26□□□□□ -1.41
MSH3P25336 SNZ2YNL333W 897 nt6.26□□□□□ -1.41
MSH3P25336 IZH4YOL101C 939 nt6.26□□□□□ -1.41
MSH3P25336 YBR013CYBR013C 390 nt6.26□□□□□ -1.41
MSH3P25336 SET5YHR207C 1581 nt6.26□□□□□ -1.41
MSH3P25336 MNS1YJR131W 1650 nt6.26□□□□□ -1.41
MSH3P25336 GAS2YLR343W 1668 nt6.26□□□□□ -1.41
MSH3P25336 ACS2YLR153C 2052 nt6.26□□□□□ -1.41
MSH3P25336 ENT2YLR206W 1842 nt6.25□□□□□ -1.41
MSH3P25336 YDL022C-AYDL022C-A 249 nt6.25□□□□□ -1.41
MSH3P25336 MSS2YDL107W 1056 nt6.25□□□□□ -1.41
MSH3P25336 YGR270C-AYGR270C-A 219 nt6.25□□□□□ -1.41
MSH3P25336 APS3YJL024C 585 nt6.25□□□□□ -1.41
MSH3P25336 CDC8YJR057W 651 nt6.25□□□□□ -1.41
MSH3P25336 HOT13YKL084W 351 nt6.25□□□□□ -1.41
MSH3P25336 YKR047WYKR047W 306 nt6.25□□□□□ -1.41
MSH3P25336 YLR317WYLR317W 435 nt6.25□□□□□ -1.41
MSH3P25336 POP8YBL018C 402 nt6.25□□□□□ -1.41
MSH3P25336 TAP42YMR028W 1101 nt6.25□□□□□ -1.41
MSH3P25336 DOM34YNL001W 1161 nt6.25□□□□□ -1.41
MSH3P25336 YPR071WYPR071W 636 nt6.25□□□□□ -1.41
MSH3P25336 YPR142CYPR142C 564 nt6.25□□□□□ -1.41
MSH3P25336 SLM5YCR024C 1479 nt6.25□□□□□ -1.41
MSH3P25336 MKC7YDR144C 1791 nt6.25□□□□□ -1.41
MSH3P25336 VMS1YDR049W 1899 nt6.25□□□□□ -1.41
MSH3P25336 RFA1YAR007C 1866 nt6.25□□□□□ -1.41
MSH3P25336 EXO1YOR033C 2109 nt6.25□□□□□ -1.41
MSH3P25336 DDC1YPL194W 1839 nt6.25□□□□□ -1.41
MSH3P25336 YGL230CYGL230C 444 nt6.24□□□□□ -1.41
MSH3P25336 APN1YKL114C 1104 nt6.24□□□□□ -1.41
MSH3P25336 YLR049CYLR049C 1287 nt6.24□□□□□ -1.41
MSH3P25336 COS3YML132W 1140 nt6.24□□□□□ -1.41
MSH3P25336 AIF1YNR074C 1137 nt6.24□□□□□ -1.41
MSH3P25336 RPB8YOR224C 441 nt6.24□□□□□ -1.41
MSH3P25336 ATP20YPR020W 348 nt6.24□□□□□ -1.41
MSH3P25336 snR32snR32 188 nt6.24□□□□□ -1.41
MSH3P25336 MED8YBR193C 672 nt6.24□□□□□ -1.41
MSH3P25336 MRPL37YBR268W 318 nt6.24□□□□□ -1.41
MSH3P25336 COS2YBR302C 1140 nt6.24□□□□□ -1.41
MSH3P25336 ELP2YGR200C 2367 nt6.23□□□□□ -1.41
MSH3P25336 VTH1YIL173W 4650 nt6.23□□□□□ -1.41
MSH3P25336 VTH2YJL222W 4650 nt6.23□□□□□ -1.41
MSH3P25336 GPM2YDL021W 936 nt6.23□□□□□ -1.41
MSH3P25336 BUD30YDL151C 582 nt6.23□□□□□ -1.41
MSH3P25336 BTT1YDR252W 450 nt6.23□□□□□ -1.41
MSH3P25336 REH1YLR387C 1299 nt6.23□□□□□ -1.41
MSH3P25336 ATG12YBR217W 561 nt6.23□□□□□ -1.41
MSH3P25336 RAD53YPL153C 2466 nt6.23□□□□□ -1.41
MSH3P25336 UTP7YER082C 1665 nt6.23□□□□□ -1.41
MSH3P25336 HSF1YGL073W 2502 nt6.23□□□□□ -1.41
MSH3P25336 LYS21YDL131W 1323 nt6.23□□□□□ -1.41
MSH3P25336 CYK3YDL117W 2658 nt6.22□□□□□ -1.41
MSH3P25336 ASH1YKL185W 1767 nt6.22□□□□□ -1.41
MSH3P25336 YCR024C-BYCR024C-B 267 nt6.22□□□□□ -1.41
MSH3P25336 YFL019CYFL019C 354 nt6.22□□□□□ -1.41
MSH3P25336 YFR057WYFR057W 456 nt6.22□□□□□ -1.41
MSH3P25336 GRE3YHR104W 984 nt6.22□□□□□ -1.41
MSH3P25336 PSF2YJL072C 642 nt6.22□□□□□ -1.41
MSH3P25336 NPT1YOR209C 1290 nt6.22□□□□□ -1.41
MSH3P25336 CAR1YPL111W 1002 nt6.22□□□□□ -1.41
MSH3P25336 AMD1YML035C 2433 nt6.22□□□□□ -1.41
MSH3P25336 AAP1YHR047C 2571 nt6.22□□□□□ -1.41
MSH3P25336 YDR098C-AYDR098C-A 1323 nt6.22□□□□□ -1.41
Retrieved 100 of 7,029 protein–RNA pairs in 23.9 ms