Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO2P00403 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
MT-CO2P00403 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO2P00403 AC090877.2-201ENST00000558441 1738 ntBASIC18.18■□□□□ 0.5
MT-CO2P00403 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO2P00403 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO2P00403 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO2P00403 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO2P00403 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
MT-CO2P00403 AC129492.7-201ENST00000622992 756 ntBASIC18.18■□□□□ 0.5
MT-CO2P00403 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.18■□□□□ 0.5
MT-CO2P00403 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO2P00403 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
MT-CO2P00403 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO2P00403 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO2P00403 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO2P00403 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-CO2P00403 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-CO2P00403 CLDN5-201ENST00000403084 2357 ntBASIC18.17■□□□□ 0.5
MT-CO2P00403 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-CO2P00403 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-CO2P00403 AL117328.2-201ENST00000624617 1940 ntBASIC18.17■□□□□ 0.5
MT-CO2P00403 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-CO2P00403 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-CO2P00403 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-CO2P00403 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
MT-CO2P00403 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO2P00403 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO2P00403 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO2P00403 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO2P00403 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO2P00403 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO2P00403 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.16■□□□□ 0.5
MT-CO2P00403 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.16■□□□□ 0.5
MT-CO2P00403 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO2P00403 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.16■□□□□ 0.5
MT-CO2P00403 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
MT-CO2P00403 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-CO2P00403 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-CO2P00403 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.15■□□□□ 0.5
MT-CO2P00403 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-CO2P00403 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-CO2P00403 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MT-CO2P00403 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-CO2P00403 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.5
MT-CO2P00403 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
MT-CO2P00403 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MT-CO2P00403 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-CO2P00403 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
MT-CO2P00403 KRT18P60-201ENST00000312876 1297 ntBASIC18.14■□□□□ 0.49
MT-CO2P00403 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.14■□□□□ 0.49
MT-CO2P00403 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
MT-CO2P00403 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-CO2P00403 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
MT-CO2P00403 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MT-CO2P00403 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.14■□□□□ 0.49
MT-CO2P00403 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-CO2P00403 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-CO2P00403 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-CO2P00403 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.13■□□□□ 0.49
MT-CO2P00403 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-CO2P00403 LONRF2P2-201ENST00000439212 571 ntBASIC18.13■□□□□ 0.49
MT-CO2P00403 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.13■□□□□ 0.49
MT-CO2P00403 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MT-CO2P00403 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
MT-CO2P00403 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-CO2P00403 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.13■□□□□ 0.49
MT-CO2P00403 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.13■□□□□ 0.49
MT-CO2P00403 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.13■□□□□ 0.49
MT-CO2P00403 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-CO2P00403 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.12■□□□□ 0.49
MT-CO2P00403 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-CO2P00403 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-CO2P00403 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-CO2P00403 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MT-CO2P00403 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-CO2P00403 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.12■□□□□ 0.49
MT-CO2P00403 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MT-CO2P00403 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-CO2P00403 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-CO2P00403 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-CO2P00403 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
MT-CO2P00403 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-CO2P00403 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-CO2P00403 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-CO2P00403 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-CO2P00403 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.11■□□□□ 0.49
MT-CO2P00403 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-CO2P00403 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-CO2P00403 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MT-CO2P00403 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.11■□□□□ 0.49
MT-CO2P00403 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MT-CO2P00403 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.11■□□□□ 0.49
MT-CO2P00403 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
MT-CO2P00403 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-CO2P00403 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-CO2P00403 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-CO2P00403 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-CO2P00403 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-CO2P00403 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms